Eurypyga helias (sunbittern): 104513882
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Entry
104513882 CDS
T08356
Symbol
SMG7
Name
(RefSeq) LOW QUALITY PROTEIN: protein SMG7
KO
K14409
protein SMG7
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104513882 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehs03019
]
104513882 (SMG7)
Messenger RNA biogenesis [BR:
ehs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104513882 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
104513882 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
104513882
NCBI-ProteinID:
XP_010155684
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKN
RANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSA
IVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS
KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTQWSVSDFIKAFIKFHG
HVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQH
SYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVF
QEAVVDERRYIWPWLISLLNSFQPHEEDLSNNNATPLPEEFELQGFLALRPSFRNLDFSK
GHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPS
EAKESLALQETSVAEPLSTDGSPGLKSVLSSGRSLNNNCDAGEKPMVTFKENIKPREMNR
DQGRVXXXXXXERRDYSKGIVANKNDGKKDNNKRKNETKKCGLDKMQEAGKQNVAVQVKS
QTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPVAF
SMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQTP
PPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQYPQTD
SSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPME
PYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSNMDRRGKRQGVFRPEQDAVSRMTFEDPK
SSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSQ
SSSFLSLSGFSLNQERYPNNSMFNEIYGKNMNTSTKTEVTPSVAHQETSLYSLFEGTPWS
PSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVADRWK
TDKPAMGGFGLDYLPATSSSSESSWHQSSAPSGTWAAQGPPAMEDSSAVLMESLKSIWSS
SMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcgaagctgggtccagcagaagtctggacgtccagacaggctctgcaagac
ttatatcagaaaatgctagtgaccgatttggaatatgctttagataaaaaagtggagcag
gacctttggaatcatgcctttaaaaatcagatcacaacactgcagggtcaggcgaaaaat
agagcaaatccaaatcggagtgaagttcaggcaaacctttctctgtttttagaggcagct
agtggcttctacacacagttattacaggaattgtgcacagtttttaatgtagacttgcca
tgtcgtgtaaagtcttcccagttgggaatcattagcaataaacagacgcacaccagtgcc
atagtgaagccgcagtctagttcctgctcttacatctgccagcactgccttgtccacctt
ggagatattgctcgttataggaatcagaccagccaggcagagtcttactacagacatgca
gctcagcttgtcccttctaacggtcagccttataatcagttggctattctagcttcctcc
aaaggagaccacttgaccacaattttctactactgcagaagcattgctgtgaaatttcct
ttcccagctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgat
gaggtaaagactcaatggagcgtgtctgacttcatcaaggcgtttattaaattccacggc
catgtgtacctgagtaagagcttggagaagctgagccctcttcgagaaaagctggaagaa
cagttcaagaggttgttgttccaaaaggccttcaattctcagcagttggtacatattact
gttatcaatctgtttcaactacatcacctgcgagacttcagcaatgaaacggagcagcac
agctacagccaggatgagcagctctgctggacacagttactggctctcttcatgtccttt
cttggagttctgtgcaagtgtcctttacaaaatgactaccaggaggattctggggctgca
tatcctcttccagctgtgaaggtttcaatggactggctgaaacttcggcccagtgttttc
caggaggcagttgttgatgaaagacggtacatatggccctggctgatttctcttctaaac
agcttccagcctcacgaagaagatctgtccaataataatgcaaccccccttccagaagaa
tttgaattgcaaggattcttggctctgaggccctcattcaggaacttggatttttccaaa
ggccaccaggcaattacaggagataaggaagggcaacagcgtcggatacggcaacagcgt
ctgatcttcacagggaaatggattgctgataaccagccgaggttgattcagtgtgaaaat
gaggtaggaaagctgttgtttttgacggaaattccagaattgctactagaagaccctagt
gaagccaaagagagtctcgccttgcaggaaacatctgttgcagagccactatctacagat
gggagccctggactcaaatcagttctgtcctctggaagaagcctgaacaacaactgtgat
gcaggagaaaaaccaatggtcacgttcaaagagaacatcaagccacgggaaatgaacaga
gatcaagggcgagtcnnnnnnnnnnnnnnnnnggaaagacgggactatagcaaaggaata
gtagccaataagaatgatggaaagaaggataacaataaaagaaagaatgagaccaagaaa
tgcggcttggataagatgcaggaagcaggaaagcagaatgtggcagtccaggtgaaatcc
cagacagagatgaggaagactccggtgtctgaagccaggaaaacacctgtaactcagact
ccaagtcaggccagcagttcccagttcatccccattcaccacccaggagcttttcctccc
cttcctagccggccagggtttccaccaccaacctatgtcgtcccccctcctgtggctttc
tccatgagcacggggtacaccttcccaggtggtgtgtccgtcccaggaaccttcctccag
cccacagctcactcgcctgcaggaaaccaggtgcaaggtgggaaacagtcccacattcct
tacagccagcaacggccctctggaccagggccgatgacccagggacctcagcaaacacca
cctccttcccagcaacccctctcatctttaccagctcaggcaacagcacagtctgcaagc
cagttacaggtccaggctctggcccagcaacagcagcaacagtcccctacaaaggctgtg
cagggcctggggaagagcccaccacaccactccggattccagcagtatccgcagacagac
tcgtcaaagcagctctggaacccacctcaagtccaaggctcactggggaagatcatgcct
gtaaagcagtcctattacctgcaggcccaggaccctctaaaattatttgaacagtcatta
cagcctcccgtgatgcaacagcaacctctggagaaaaaaatgaagcctttcccaatggag
ccatataaccagaacccctcagaagtcaaggtgccagaatattactgggactcttcctat
ggcatggctgacaacagggtgatggcacagcagtctaacatggaccgcaggggaaaacgg
caaggagtcttccgcccagagcaggatgctgtctccaggatgacctttgaggaccccaag
agctcccctctgcttcctccggacctgttaaagagtctggctgccttggaggaggaggaa
gagctgattttctctaatcctcctgatctttacccagctctgctggggcctctcgcctct
cttcctggacgaagcctctttaagtccctgctggaaaaaccatcagaattgatgtctcag
tcatcatctttcctgtccctcagtggcttttctcttaatcaggaaagatacccaaataac
agcatgttcaatgagatatatgggaaaaatatgaataccagcacaaaaacagaagtcacc
ccttcagttgctcatcaggagacttcactatattctctctttgaagggactccgtggtct
ccatcccttccagccagctcagatcattcgacaccagccagccagtctccgcactcctcc
aaccccagcagcttgccaagctcccctccaacccataaccacaattctgttcccttctcc
aacttcggacccattgggactccagacaacagagacaggagggtcgcggaccgctggaaa
acagataagccagcaatgggtgggtttggtctggactatctcccagcaacgtcgtcatcg
tcggagagcagctggcaccagtccagtgctcctagtggcacctgggcagcccaaggccct
cccgccatggaggactcctcagctgtgcttatggagagcctgaagtccatctggtccagc
tccatgatgcaccctggcccctcagccctggagcagctgttaatgcagcagaagcagaag
cagcaacgcggacaaggcgccatgaacccgccgcattga
DBGET
integrated database retrieval system
