Eurypyga helias (sunbittern): 104513980
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Entry
104513980 CDS
T08356
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104513980 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ehs03000
]
104513980 (ARID1A)
03021 Transcription machinery [BR:
ehs03021
]
104513980 (ARID1A)
03036 Chromosome and associated proteins [BR:
ehs03036
]
104513980 (ARID1A)
Transcription factors [BR:
ehs03000
]
Eukaryotic type
Helix-turn-helix
ARID
104513980 (ARID1A)
Transcription machinery [BR:
ehs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104513980 (ARID1A)
Chromosome and associated proteins [BR:
ehs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104513980 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104513980
NCBI-ProteinID:
XP_010155794
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
AVGLAGSNSSPSYFLFGANITEGARFFRNELSQDSFGSQASSAPSMASSKGQEDMNLNLQ
SRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIR
GPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYM
QRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQP
NYNAMSNANYPSPGMGGSMNPMGAGSQLHGQTGVPPYSGLPPGRMSHATMGNRPYGPNMA
NMPPQVGTGMCPPPGGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGPPYGQ
GINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKAE
SKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLY
RLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGED
PPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQ
MPPLPGIRSNSVGLQDAFPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPY
SSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYTYGGPYDRVRTEPG
MGPEGNLATGTPQPNIMPSTPESGMYSPSRYPQQQQQQRHDSYGNQFSTQGTSSGSPFPS
QQTTMYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSAGQGQTQQQLPPAQTQQASQQP
SAQPSPQQDLYNQYGSTYPAADRRSAGGPQNQFPFQFGRERVSAPPGSNAQQNMPPQMMG
GPIQSAPEGPQQGAMWQGRNEIGYSYANRQSTGSAPQGPAYHGVTRTDEILHSDQRVNHE
GPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPAPLPRPLENRTSPS
KSPFLHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTAK
DIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRR
CLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSHEEGEEEDEPRSLNCEEEEEDEEEE
EAAFSSKDKAPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQEFESGLLHWRI
GGGDTTEHIQTHFESKTELLLTHKRASCNSALRKRAAAESNPSTREGETLPSDSSSEKRI
TATMDDMLSARPGSLAGEEEEVKASETAKESGKFPFGISPAQSHRNIKILEDEPHSKDET
PLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERK
QAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPIL
DGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLE
KLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAA
TQFQQSQAGLMHMQNPPFESTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSP
LMNSLVSQVICDVLFLIGQS
NT seq
5104 nt
NT seq
+upstream
nt +downstream
nt
agcagtggggcttgctggctccaactcttcgccatcttatttcctgtttggggcaaacat
caccgagggcgcacggttcttccgcaatgagttatctcaagactcatttgggtcccaggc
atcatccgctccctcaatggcttccagtaaagggcaagaagatatgaacttgaaccttca
gtccagaccttctagcctgccggacctgtctggttcaatagatgatctgcccatgggtac
agaaggagccctgagtcctggagtgagcacatcagggatttccagcagtcaaggagagca
gagtaacccagctcagtctcctttctctccacatacctctcctcacctgccaggcatcag
aggaccctccccatccccagttggatctccagcgagcgttgctcagtcccgctctggtcc
gctttcacctgctgcagtaccaggcaatcagatgccaccccgaccgcccagtggccagtc
ggacagtatcatgcatccttccatgaaccagtcaagcatagcgcaagatcgaggttacat
gcagaggaatcctcagatgccccagtacagctcgccccagcccggctcagccttatctcc
ccgtcagtcttctggaggacagatgcacgctggcatggggccgtaccagcagaactccat
gggaagctacggaccccagggtgggcagtacggacctcaaggaggttatcccaggcagcc
aaactacaacgctatgtccaacgccaactaccccagtcccggaatgggaggaagcatgaa
ccccatgggcgcagggagccagctgcatgggcagactggtgtcccaccctacagcgggct
tcctccaggccggatgagccacgcgaccatggggaacagaccctacggacctaacatggc
gaacatgccgcctcaggtggggacagggatgtgccccccgccgggcggcatgaaccgcaa
agcacaggaagcggccgccgccgccatgcacgctgctgccaactccatccagaacaggcc
tcctggttatcccaacatgaaccaaggaggaatgatgggcactggacctccgtatggaca
gggaattaacagtatggcgggcatgataaacccccagggcccaccctatcccatgggggg
gaatatggctaacaactccgcagggatggcagcaagccctgaaatgatgggtcttgggga
cgtcaaattaacacctgcaactaagatgaacaacaaggcagatgggacgccaaaagcaga
atccaagtcaaagaagtccagttcctctactacaaccaatgagaagatcaccaaactcta
cgagctgggtggggagcctgagaggaagatctgggtggatcgttacctggccttcacgga
agagaaggccatgggcatgacaaatctcccggcggtaggcaggaaacccttggaccttta
ccggctctacatctccgtgaaggagatcggaggattgactcaggtcaacaaaaacaagaa
gtggcgggagttagccacaaacctcaacgtgggcacgtccagcagtgcggcgagttcttt
gaagaagcagtacatccagtgtctctacgcctttgagtgcaagattgagcgaggtgaaga
cccccctccagatatctttgcagctgctgattcaaagaagtctcagactaagatacagcc
tccatctccagcgggttcgggctcaatgcagggtcctcagacgcctcagtccaccagcag
ctccatggcagagggaggagacctgaagccaccgactccagcgtctacgccacacagtca
gatgccgcctttgccaggcatcaggagtaactcggtgggccttcaggatgccttcccaga
tggtagtgatcctacgttccagaagcggaactccatgactccaaatccagggtaccagcc
cagcatgaatacctctgacatgatgggtcgcatgtcttacgagccaaataaagatcctta
cagcagtatgaggaaagctccaggaagcgatcccttcatgtcctcagggcagggccccaa
cagtgggatgggtgacccttacaatcgtgctgcaggtccagggatgggtaacatggccat
gggacagcggcaacactatacctacggaggcccttacgacagggtgaggacggagcccgg
catgggacccgagggcaacttagccaccggaactccgcagccgaacatcatgccttccac
cccggaatcggggatgtactctcccagccgctacccgcagcagcagcagcagcaaagaca
tgattcctatggcaatcaattctccactcaaggcacatcctcgggcagcccctttcccag
ccagcaaaccaccatgtatcagcagcaacagcagaattacaagcgaccgatggacggcag
ctacggcccccccgcgaagcggcacgaaggggagatgtacaacgtaccgtacagcgccgg
gcaggggcagacgcagcagcagctgccgccagcacagacccagcaagcgagccagcagcc
gtctgcgcagccgtctccgcagcaggacttgtacaaccagtacgggagcacgtaccccgc
tgccgaccgccgatccgccggagggcctcagaaccagttcccattccaatttggcagaga
gagggtctcggctcccccaggctccaatgctcagcaaaacatgcctccgcagatgatggg
gggtcccatccagtccgctccagagggtccgcagcaaggtgccatgtggcaggggcgcaa
cgaaatagggtacagctatgccaatcggcagagcaccggctctgcgccccaggggcctgc
ttaccacggagtgactcgaacggatgaaatcctgcattcagaccagagggtcaaccacga
gggcccgtggccttcccacgggaaccggcaacctccttacggtccctctgcccctgtgcc
cccaatgactaggcccccccagtctaactaccagaccccccctagcatgcagaatcacat
tcctcaggtatccagcccagcacctctgcccagacctctggagaatcgtacttctcctag
taaatctccattcctgcactcggggatgaaaatgcagaaggcgggaccgccggtccctgc
ctcgcacataacaccagcagctgtacagcctcccatgatccgacgagacatcaccttccc
tccgggatcggtagaagctacgcaacctgtgttgaagcagaggagacggctgacggcgaa
agatatcggaactcctgaagcctggagagtgatgatgtctctgaagtctgggctgctggc
tgaaagtacgtgggccttagataccataaacatcctgctctatgatgacaacagcataat
gaccttcaacctcagccagctgccaggcttgctggaactcttggtggagtatttccggcg
ctgcctgatcgagatctttggaatcctgaaggaatacgaggtgggagatccagggcaaag
aacactattagatcctgaaaggttctgcaaatcttcagcttcctctcacgaagaagggga
ggaggaggatgaaccgcggagcctgaactgcgaggaggaagaagaggacgaggaagagga
ggaggctgcattttcgagcaaggacaaagcgcctctagagagcagcgaggaaaaactagt
tagcaaattcgacaagctcccggtgaaggttgtgcagaaaaatgacccctttgtggtaga
ttattcagacaagctggggcgagtgcaggagttcgagagcgggctgctgcactggcggat
tggcggcggagataccaccgagcacatccagacccactttgagagcaagacggagctgct
cttgactcataaacgagcttcctgcaactccgccttgaggaaacgcgcagcagctgagag
caacccaagcacgagggaaggggagactcttccgtccgacagctcctcggagaagaggat
aaccgccaccatggatgacatgctttcggcacgtccgggctccctggcgggggaggagga
ggaggtgaaagcttcggaaacggcgaaggaaagcggcaagtttccctttggcatcagtcc
agctcagagccacagaaacataaaaattctggaggacgaacctcacagtaaagatgagac
gcccctctgcaccctcctcgactggcaggactctctggcgaagcgctgcatctgcgtctc
taacatcatcaggagtttatcgttcgtgccgggcaacgactttgaaatgtcgaaacatcc
cgggctgctgctgatcctagggaaactgatcctcttacaccacaagcatccggaacgcaa
acaggcccccctgacgtatgagaaagaggaggagcaggaccaaggggtgagctgcaacaa
ggtggagtggtggtgggactgcttggagatgctgcgtgaaaacacgctggtcacgttggc
caacatttccggccagctggacctttccccttacccggaaagcatctgtttgcctatcct
ggatggactcctccactgggcggtatgtccgtccgcagaggcccaggatccctttccaac
actggggcccaacgcggtcctctcccctcagagactggttttggaaacactcagcaaact
cagcatccaggacaacaacgtggatttgattctggcgactccccccttcagtcgcttgga
gaagctgtacagcaccatggtgcgcttcctcagtgacagaaagaacccggtgtgtcggga
gatggctgtggtactactggccaacttggcgcagggggacagcctggcagcgcgagccat
cgccgtgcagaagggcagcattggcaacttgctgggcttcttggaggacagcctggccgc
cacgcagttccagcagagccaggccggcttgatgcacatgcagaacccgcccttcgagtc
gacgagcgtggacatgatgcgccgagccgctcgggcgctgctcgccctggccaaggtgga
cgagaaccactcggagttcacgttatacgagtcgcggctgttggacatctccgtgtcgcc
tttgatgaactctttggtttcacaggttatctgtgacgtactgtttttaattggccagtc
atga
DBGET
integrated database retrieval system
