Eurypyga helias (sunbittern): 104515263
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Entry
104515263 CDS
T08356
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03013
Nucleocytoplasmic transport
ehs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104515263 (UPF3A)
03015 mRNA surveillance pathway
104515263 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehs03019
]
104515263 (UPF3A)
Messenger RNA biogenesis [BR:
ehs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104515263 (UPF3A)
mRNA cycle factors
P-body specific factors
104515263 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
104515263
NCBI-ProteinID:
XP_010157478
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MQVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTTDPSLYPHLYSRAYINFRNPEDILLF
RDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCAD
EEKICANPEILLGEIEARTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKK
RLREEEKRKRREEERRKRKEVEKQKKISEKEIRIKLLKKPEKGDELVSEKHKEKGEEADV
EENKWDKSPGSGNIKSKSLEGSLKELKEKSQNDSDKEQRDLERRFREKEPERQRYRLDDG
RKHRAHYEFDKFVRRNEEELKWGKGYNQDRGKKGNYNYSFTVEAVDKLGKEDKCDDMASK
KERIRNKDRPAMQLYQPGARIRTPMGSASKTCDCSGKSFEDALDKKYEADNSAGGGSEKS
EEAE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtagttattcgtcggcttcctccttgtctaactaaggagcaactggaggaacag
ctacatcctctacctgcccatgattattttgagttttgcactactgatcccagcctttat
cctcatctctactcaagagcatacattaactttagaaatcctgaggacatccttcttttt
agagatcgctttgatggctatgtcttcattgataataaaggtttggagtatcctgcagtg
gttgaatttgctccgttccagaagatttcaaaaaagaagctaaagaagaaagatgccaaa
gctgggagcattgaagatgatccagaatacaggaaatttttagagagttattgtgctgat
gaagagaaaatctgtgccaatcctgagattcttttgggagagattgaggccagaacaagg
gaactcattgctagaagaacaacaccccttttggaatatattaaaaatagaaaattagaa
aagcagagaatccgagaagagaaaagagaagaacgaaggcggagagaattggagaagaaa
cgtctgcgggaggaagagaaaaggaagcgcagagaagaagaaagacgtaaaagaaaagaa
gtagagaagcaaaagaagatttctgaaaaagaaataagaatcaagcttcttaagaagcct
gaaaaaggagatgagctggtcagtgaaaagcacaaagaaaaaggtgaagaagctgacgtt
gaagaaaacaaatgggataaatcacctggatctgggaatataaaatccaaatcattggag
ggttcactaaaagaacttaaggaaaagtcacaaaatgatagtgacaaagagcaaagagat
ttggagagaagatttcgtgaaaaagaacctgaaaggcaaaggtatcgattggacgatggc
agaaagcatagagctcactatgagtttgacaagtttgtgagaaggaatgaagaagagctg
aaatgggggaaaggatacaaccaagacagaggaaagaaagggaactacaactacagcttc
actgtggaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaa
aaggagcgcataagaaataaggatcgcccagccatgcagttgtaccagccaggagctcgc
attcgaacgcctatgggatctgcaagtaaaacctgtgactgcagtgggaaatcctttgaa
gatgctcttgataaaaagtatgaggcagataattcagctgggggtggttctgagaagagc
gaagaagcagaataa
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