Eurypyga helias (sunbittern): 104516312
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Entry
104516312 CDS
T08356
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
ehs
Eurypyga helias (sunbittern)
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehs03021
]
104516312 (SCAF4)
03041 Spliceosome [BR:
ehs03041
]
104516312 (SCAF4)
Transcription machinery [BR:
ehs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104516312 (SCAF4)
Spliceosome [BR:
ehs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
104516312 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104516312
NCBI-ProteinID:
XP_010158907
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All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSR
HQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDM
AAGTSATAPVTENATNNEGSPPPPTKVPSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQT
TQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQPPEQKAAFPPPEQKT
SFDKKLLDRFDYDDEPEAVEESKKEDSAPSPSVSQPALTPLSFSAQAGWCSIPGGFPGEG
MQQPVFPQLPNMDPFQQRMMGIQQDPMRHQVPLPPNGQMPGFGLLPTPQFPPMAQPVIPP
AAPVQQTFQSPFPVQSESHMQKPHQQDMEVEQPPVQEGKRHASDNRKSRSRSASRSPKRR
RSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERERERRSKGLPQIKSETVSVC
STTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRG
NFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETL
SPEWKGIPKKSENEVAQNGGAEATHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPS
GPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPIT
PPVSVPHTPAVNIPNSTATGVNEDTTKDSSVGNPIPTVVSGSRGTAESTDSSKIYGTVPP
PVAPTNVPAPVTQAIPLLVEADKVVHVLGVASFNVQHYQPGG
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacctccgatttctcgagcaaaaatgattctcatcacaaaagctgccatt
aaagctattaagctgtacaagcatgttgtccagatcgtagagaagtttatcaaaaagtgc
aaaccggaatataaagtccctggattgtacgttattgactctattgttcgtcagtctcgt
caccagtttggaacagacaaagatgtttttgggccaagattctctaaaaacattactgcc
acattccagtatttgtatctctgtccatctgaagacaagagtaaaatagtccgcgtcctg
aacctttggcagaaaaacggagtatttaaaattgaaataattcagcctcttctggatatg
gcagcaggaactagtgccactgcaccagtgacagaaaatgctactaataatgaaggttcg
ccaccccctccaacaaaggttccttcagagccccctcaagttactgctaactcagtacct
actgtgccacagttgcccagttctgatgcctttgcagctgtagctcagctgttccaaaca
acgcaaggacaacagcttcagcaaatccttcagacttttcaacagcctcaaaaaccccag
tcaccggtcatagacaacactgtgatggctcaggttcaagctattactgctcagttgaaa
actacagcagcacaaccaccagaacaaaaagctgctttcccaccacccgagcaaaaaaca
tcatttgacaaaaagctgctggatcggtttgactatgatgatgaaccagaagcagtggaa
gagtcaaagaaagaagattcagctccttctccttcagtttctcagccagctttgacccct
ctctcattcagtgcacaggctggatggtgctcgatacctggtggatttccaggagaaggt
atgcaacagccagtgtttccccaactcccaaatatggatccttttcagcagcgaatgatg
ggaatacaacaggatccaatgcgtcaccaggttccgcttcctcctaatgggcaaatgcca
ggttttggtctcctgcctactccacagtttccacccatggctcagcctgtaattccgcca
gcagcacctgtgcagcaaacttttcagtctccttttccagtacagagtgaatcacacatg
caaaaaccacatcagcaggatatggaagtagaacagccacctgttcaagagggaaaacgg
catgcttctgacaacagaaagtcaagatccaggtctgcatcaaggtcacctaaaaggaga
cgttcaagatctggctcccgatctcgaagatcacgtcatcgtcgatctcggtcgcggtcc
agggatagacgccgacactctccaaagtctcggtcacaagaaagacgtgaacgtgagagg
gagagagaacgcaggtcaaaaggccttccccagatcaagtcagaaactgttagtgtttgt
agtactacgctttgggtaggacagcttgacaaaaggacaactcaacaggatgttggaagt
cttttggaggagtttggcccgattgaatcaataaacatgataccgcctagaggatgtgcc
tatattgtgatggttcacagacaagatgcttaccgtgccctacaaaaactgagccgagga
aacttcaaagtcaatcagaagtctataaagattgcatgggctttgaataaaggaataaag
ccagattacaagcagtattgggatgtagaattaggtgttacttacataccatgggacaaa
gtgaaacctgaagatcttgaaagcttctgtgaaggaggaatgttggacaacgaaactctt
agtccagagtggaaggggattcccaagaagtctgaaaatgaagtagctcagaatggaggt
gcagaagctacacataatgaaccagtgtcacctatacctaaagctttacctgttccaatt
cccgttcccatgcctgcaccaataacagtacctcctccacaggttccaccacatccatca
ggtcctcctgtggttggtgcactccaaccacctgctttcacagcacctttaggaatccca
cctcctggatttgctcctggagtgccaccaccgccaccgcctccatttttacgacctggt
ttcaacccaatgcatttacccccaggctttcttcctcctgggccaccaccacctataact
cctccggtatctgttcctcacactccagcagtaaacatcccaaattctacagcaactggt
gtgaatgaagacactacaaaagattcatctgtaggaaatcccatcccaacagtggtttct
ggatccagagggactgctgaatctaccgatagttccaaaatatatgggactgttccacct
cctgtagcacctactaatgtacctgctcctgtcacccaagcgattccgcttcttgtggag
gcagataaagtcgtccacgtgctcggggtggcttctttcaacgttcagcattatcaacca
gggggatag
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