KEGG   Eurypyga helias (sunbittern): 104516352
Entry
104516352         CDS       T08356                                 
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
ehs  Eurypyga helias (sunbittern)
Pathway
ehs03030  DNA replication
ehs03410  Base excision repair
ehs03420  Nucleotide excision repair
ehs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ehs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104516352 (RFC1)
   03410 Base excision repair
    104516352 (RFC1)
   03420 Nucleotide excision repair
    104516352 (RFC1)
   03430 Mismatch repair
    104516352 (RFC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ehs03032]
    104516352 (RFC1)
   03400 DNA repair and recombination proteins [BR:ehs03400]
    104516352 (RFC1)
DNA replication proteins [BR:ehs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104516352 (RFC1)
DNA repair and recombination proteins [BR:ehs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104516352 (RFC1)
SSDB
Motif
Pfam: RFC1 BRCT AAA PTCB-BRCT AAA_22 BRCT_2 AAA_14 Rad17 AAA_5 RuvB_N RNA_helicase AAA_16 AAA_30 AAA_33 AAA_17 AAA_18 AAA_7 nSTAND3 TIP49 Zeta_toxin NTPase_1 AAA_19 NPHP3_N
Other DBs
NCBI-GeneID: 104516352
NCBI-ProteinID: XP_010158958
LinkDB
Position
Unknown
AA seq 908 aa
ARKDSGGEQTVLSIKTSPNTTGKYKQSEGEAKNHAAKQEIKPEHSKGSRLSLPSSDGKTA
RELRDKATPLKPSSKLVSLKRNEETAEKAQGAPSSASKSKAASGKEEKTTPKKEKISPKK
TESVSPEDSEKRRINYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLECIER
DEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASTLGTKIIDEDGLFDLIRTMP
GKKSKYELAAETEAKKVESRPKKTPQKAEAGKRNFSPFKREADNKKMKSTPEKGETFKSV
KKKDSTAVRKLTDFKCRTAEEKGAPQPKENLVSGVTEDKAERLLWVDKYKPVSLKAIIGQ
QGEQSCANKLLRWLRNWHRNTSEDGQAKTNKTGGKDDGAGFKAALLSGPPGVGKTTTASL
VCKELGYSFVELNASDTRSRNSLKEVVAESLDNTSIKEFCSGTSSSVSGKHVLIMDEVDG
MAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKMRSLVHYCFDLRFQRPRLEQIKGAM
MSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAKKDI
KLGPFDVVRKVFAAGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGNLKKH
LVLLSRAADSICDGDIVDKQIRSKQNWNLLPTQAIYASVLPGELMRGYMSQFPIFPSWLG
KFSSTGKHDRVIQELAMHMSLRTQTCKRTVNLEYLPYLRDALVQPLKDGGADGVQEAITF
MDSYCLMKEDIENIMEISTWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLGSVKTSK
RQSGSGVSLDLNEDLNVEETQSDEDEQDTVESDAMIKQKKAKSSKPPKREKNEETAKKEG
KRKEKTRH
NT seq 2727 nt   +upstreamnt  +downstreamnt
gctcggaaagattcaggaggagagcaaacagtactgagcatcaagaccagtcctaacacg
acaggaaaatacaagcagtcggaaggagaagcaaagaatcacgctgcgaagcaggaaatc
aaacctgaacattcaaaaggctctcgtttgtccctgccatcatctgatggtaaaacagca
agagagttgagggataaggccacgcctttgaaacctagctctaagcttgtctctctgaaa
cgaaacgaagagactgctgaaaaagcacaaggcgctccaagttcagcgtcaaagtcaaaa
gctgcttcagggaaggaagagaagacaacaccaaagaaggagaaaatttcccccaagaag
actgagtctgtaagtcccgaggactctgaaaagaggcggatcaattaccaggcctaccga
agcttccttaatcgcgagggtccaaaagcgctgggttccaaagagatacctcagggagct
gaaaactgcttggaaggcctaacgtttgtcatcacaggcgttctggagtgtattgaaaga
gatgaggccaagtctctcattgaacgttatggaggaaaagtaactggcaacgtcagcaag
aagacaaactatctggttatggggcgagactgcggccagtcgaagtgtgaaaaggcatca
actttagggacaaaaattattgatgaggatggtctgtttgatcttattcgaactatgcca
ggcaagaagtccaaatatgagctggcggctgaaacagaggcaaagaaagtggagtcaaga
cctaaaaagacaccacagaaagctgaagctggaaaaaggaatttcagccccttcaaaagg
gaagctgataataaaaaaatgaagtctactcccgaaaaaggagaaaccttcaaatctgtc
aagaagaaagacagcactgctgttcgaaagcttaccgacttcaaatgccggactgcagag
gagaaaggagccccacagccgaaggagaacttggtttctggggttactgaagacaaagca
gagagattgctatgggtagataaatacaagcctgtatcccttaaggcaataattggacag
cagggtgagcaaagctgtgccaataaactgctccgctggctcagaaactggcacaggaat
acctcggaagatggacaagcaaagacgaataaaactggaggcaaggatgatggtgcaggt
tttaaagcagcactgctttctggtccacctggagttggtaaaaccactacagcttctctg
gtctgtaaggagctggggtacagctttgtggagctgaatgccagcgacacgcgcagcagg
aacagtctaaaggaagtagttgctgaatcgctcgacaacaccagcatcaaggagttctgc
tctggcacatcctcatcagttagcgggaaacatgtattgatcatggatgaagtggatggt
atggcaggcaatgaagacagaggagggattcaggagttgattggtttgattagacacacg
aagatacccatcatctgtatgtgtaatgaccgcaaccaccctaaaatgcgttccttggtc
cactactgtttcgatcttcgttttcagagacctcgtctagaacagattaagggtgccatg
atgtccattgcatttaaagaaggcttgaaaattccaccacctgctatgcaagagataatc
ctggcagccaatcaggacatcagacaggttttacataaccttaatatgtggtgtgcaaaa
gataaatcgttgacttacgatgaggctaaaacggatgccagcagagccaaaaaggacatc
aaactgggcccttttgatgtcgtccggaaggtttttgctgctggcgaggaggcttctcgt
atgtctcttatagacaaatcggatctcttcttccatgattattccctagcacctctcttt
gttcaagagaactatgtacatgtgaaaccagctgctgctggaggaaacctgaaaaagcac
ttggtgctcttgagcagagcagctgatagtatatgtgatggtgatattgtggacaaacag
attcgtagcaagcagaactggaatcttcttccaacgcaggccatttatgccagtgttctc
ccgggggagctgatgagaggttacatgtcccagtttcccatctttcccagctggctgggg
aaattttcatccacaggcaaacacgaccgcgtcattcaagaactggcaatgcacatgagt
ctcagaacccagacgtgcaagaggacagtgaatctggagtacctgccctatttgcgggat
gcacttgtccagcccttgaaagacggtggagcagatggtgtacaagaagctataaccttc
atggactcttactgcttgatgaaggaagacatcgaaaatatcatggagataagcacgtgg
ggaggcaaacccagtcctttttcaaagctggatcccaaggtcaaagcagcttttacacgt
gcctacaacaaggaggcgcatctgactccatattcccttggttctgtcaagacctctaaa
aggcagtctgggtccggagtgagcttggatctgaatgaggacctgaatgtggaagagacc
cagtctgatgaggatgagcaggacactgtggaaagtgatgcaatgattaagcaaaaaaag
gcaaagtcttccaagccgccaaaaagagagaaaaatgaagaaacagcaaaaaaggaaggg
aagagaaaagagaaaacaagacattaa

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