Eurypyga helias (sunbittern): 104516806
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Entry
104516806 CDS
T08356
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104516806 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehs03019
]
104516806 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ehs04812
]
104516806 (VIM)
04147 Exosome [BR:
ehs04147
]
104516806 (VIM)
Messenger RNA biogenesis [BR:
ehs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
104516806 (VIM)
Cytoskeleton proteins [BR:
ehs04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
104516806 (VIM)
Exosome [BR:
ehs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104516806 (VIM)
Exosomal proteins of other cancer cells
104516806 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
DUF1664
DUF4515
TolA_bind_tri
HMMR_N
DUF7491
DUF4200
Sec10_N
RBD-FIP
Fib_alpha
TPR_MLP1_2
YwqH-like
LAMB4
GAS
Motif
Other DBs
NCBI-GeneID:
104516806
NCBI-ProteinID:
XP_010159559
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
RFANYIDKVRFLEQQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVE
VERDNLADDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIV
FLKKLHDEEIRELQAQLQEQHIQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYK
SKFADLSEAANRNNDALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMREMEENFA
VEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIN
MPIPTFASLNLRETNIESQPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1067 nt
NT seq
+upstream
nt +downstream
nt
accgcttcgccaactacatcgataaggtgcgcttcctggagcagcagaacaagatcctgc
tggccgagctggagcagctcaagggcaagggcacgtcccgcctgggcgacctctacgagg
aggagatgcgggagctgcgccggcaggtagaccagctcaccaacgacaaggcacgcgtgg
aagtggagcgggacaacctcgccgacgacatcatgcggctgcgggagaagttgcaggagg
agatgctgcagcgggaggaggcggagaacaccctgcagtccttcagacaggatgttgaca
atgcctctctggcacgtcttgatcttgagcgcaaagttgagtccctgcaagaggagattg
tcttcttgaagaagcttcatgatgaggaaatcagagaactgcaggcccaactccaggaac
agcacatccaaatcgatatggatgtttctaagcctgatcttactgctgccctgcgtgacg
ttcgccaacagtatgaaagcgttgctgctaagaatcttcaggaagctgaagagtggtaca
agtccaaatttgcagatctctccgaagctgctaataggaacaacgatgccctgcgccagg
ccaaacaagaagctaatgaataccgcaggcagattcagtctctcacctgcgaagtggatg
ccctcaagggaagcaatgaatccctggagcgccaaatgcgtgaaatggaggagaattttg
ctgttgaagctgctaactaccaagacactattggccgcctgcaggatgagattcagaaca
tgaaggaggaaatggctcgccacctccgtgagtaccaggacctgctgaatgtaaagatgg
ctcttgatatcgagattgccacctacagaaaactgctggagggtgaagagagcaggatta
acatgcctattccaaccttcgcttctttgaacctgagagaaaccaacatcgagtctcagc
caatggttgacactcactcaaagaggacacttctaattaagactgtcgaaaccagagatg
gacaggttattaatgaaacttcccagcatcatgatgacttggagtaa
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