Eurypyga helias (sunbittern): 104517014
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Entry
104517014 CDS
T08356
Symbol
CIITA
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104517014 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ehs01001
]
104517014 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ehs04054
]
104517014 (CIITA)
Enzymes [BR:
ehs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104517014 (CIITA)
Protein kinases [BR:
ehs01001
]
Serine/threonine kinases: Other
TAF1 family
104517014 (CIITA)
Pattern recognition receptors [BR:
ehs04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104517014 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
Motif
Other DBs
NCBI-GeneID:
104517014
NCBI-ProteinID:
XP_010159849
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
SKRQIMDSAFVSENGYLDLLHSDIDPLHLYTFLDPKSSGNEDGNFSADPEVDASNYDQFN
MDFLCTMENGENGDELYVCSNTVEAYARIAGLAEYVLKDQVEDTLAGNLILNEMASENTE
KFTDIKMQKCHKRGSAESWSDASEPKYKKIVEVPAVSVGNGNFLAMPLNSLPDSSTSLTN
QHLSLSVPATNVFERSFVIPGSSAPLIPECLPVCMKGSQENTGAADPPQQILNFVLGNGT
SDVIIYPVLTSSTETLISPSFPVSLCGSDMFKEDQVLIIPSEQPCKRPKSVEAFCTSLMD
YFRDVCKSVAMEREVTLDHLFIDGTLVQSQAETRTGKNTIKTMEKELVTCSLRGKERAAL
KRSQIFQIPGGKDLETXXXXXXXGKSILVQKICQDWSNGEFSQFEFVFWFDCKQVSLPEK
RYRLKDLLLEFFVKPQEGSKEIFEYILQNPAKVLLVFDGFEELHDHENFPRSLASQPEKD
LCSIKELLSGLMQKKILNGCTLLLTARPKDKVYQYVSKVDKTIEIVGFSPQQRELYITRY
FEGLPYCENALKLIKECEYLFSHCYSPVMCRFVCFLCETALEMGDKSLPSTLTTVFLKFV
QQKIIPMKTDVAATQNQESLATLARIAWYLGEKHQSAMKSGLLPSKEVKEFALKNGFFLP
FAFPRHSDSGEEEFGCTFSDFVIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKKPYSWL
DLVPRFLAGFLFLQDDLYFCSLSNKDVKQLIKKQKTFLKYIRRLPINDFSPGRLLELLHC
IHETQSNYLLEHVALRLKPDMSFLGVVLTPADVHVLHSVLKRSRREFSLDLRNSSIDMQG
LKDLVGLKNVASFRASLGDTVRLWKSLEQTKDYELLRASTEKFVLDPFKAKTMKDVSDLS
DLVEMQEMMIHCVQDASGCSSYEIPAIKNLRKLEFALGPVCGLQGFLKLVEILAAFPSLQ
HLE
NT seq
2894 nt
NT seq
+upstream
nt +downstream
nt
acagcaagagacaaatcatggattcagcatttgtgtctgaaaacggctatcttgatttgc
tgcacagtgatatcgacccattgcatctgtatactttccttgatcctaaatcatctggaa
atgaagacggcaacttctctgcagatcctgaagttgatgccagcaactacgatcagttca
atatggatttcctgtgtacgatggaaaatggggaaaatggggacgaattgtatgtctgtt
ccaacaccgtagaagcttatgctagaatagctggattagcagaatatgtgctcaaagatc
aggtggaagacactttagcaggaaaccttattttgaatgaaatggcttctgaaaacactg
agaaatttactgacataaagatgcagaaatgtcacaaacgaggttctgcagagagctggt
ctgatgcttcagaacccaaatacaagaaaattgtggaagtccctgcagtgtctgtaggga
atggcaacttcttagctatgcctctcaacagccttccagatagctccacctcactaacta
accagcacttgtccttgtctgttccggctaccaacgtgttcgaaagaagttttgtcattc
ctggatcttcagcacctttgatcccagagtgtctacctgtctgcatgaaaggaagccagg
agaatacaggagctgcagatccccctcagcagattcttaattttgttctcggaaatggca
catctgatgttataatatatccagtgctgacttcttccaccgaaacactgatatccccaa
gttttccagttagtttatgtggttcagatatgttcaaggaagaccaagttctcataattc
cttctgaacaaccttgcaaaagaccaaagtcagtggaagctttctgtacatcacttatgg
attatttccgagacgtgtgcaaatctgtagccatggaacgtgaagtaactcttgatcacc
tgtttattgatgggacacttgttcaaagccaagctgaaaccaggactggaaagaatacca
taaaaacaatggaaaaggagctggtaacttgcagtctgcgggggaaggaaagggcagccc
ttaaaagaagccaaatatttcaaatcccaggaggtaaagacttagagactnnannnnnnn
nnnnnnnnntgggcaaaagcattcttgttcagaagatctgccaggactggtccaatggag
agttttctcaatttgaatttgtattttggtttgactgcaaacaagtaagcttgcctgaga
agcgttaccgcctgaaggatctgcttcttgaattttttgtaaaacctcaggagggaagca
aagagatctttgagtatatattgcaaaatcctgctaaagtccttctggtttttgatggtt
ttgaagagttgcatgatcatgagaattttcctcgttccttggccagccaacctgaaaaag
acctgtgcagtataaaggagctgctgtcaggactcatgcaaaagaagatactcaatggtt
gtactttattgcttacagcaagaccaaaagacaaggtgtaccagtatgtgtccaaagtgg
acaagactattgaaatagtaggattttcccctcagcaaagagaactgtacataaccagat
actttgaaggattaccctactgtgagaatgcactgaaattaatcaaagagtgtgagtact
tgttcagtcattgttacagccctgttatgtgtagatttgtttgttttctctgtgagacag
cacttgaaatgggagacaaaagccttccttcaactcttactacagtcttcctgaaatttg
ttcagcaaaagataatacctatgaaaacagatgttgcagccacgcaaaaccaagagagtc
ttgctacgctagcccgtatagcctggtatcttggagaaaagcaccaaagtgccatgaaaa
gtggtcttcttccttctaaggaggttaaagagtttgctctgaaaaatggatttttcctac
catttgcattccccagacattcagatagtggagaagaagaatttgggtgcacattctctg
attttgtcattcagaatttcttgggtgcacttcaccttatgttagcagaagagatcaagg
ataaaagtctaacaaagtacctgtcttttccatccaagaagaaaaagccttatagctggt
tagatttagtgcctcgatttttggctggatttttgttcctccaggatgacctctacttct
gctccctttccaataaggatgtaaaacaattaatcaagaagcagaaaacattcttgaaat
atattagaaggctgccgataaatgacttctcccccgggaggttactcgagcttttacact
gtattcatgaaacacaaagcaattatctcttggagcatgtggccttaaggctcaagccag
acatgtcttttctgggcgtagttcttacaccagcggatgtccatgtactgcactctgttt
taaaaaggtcaagaagagagttttccttggacttgcgaaacagcagcattgacatgcaag
ggctaaaagacttggttggcctaaagaatgtggcatcgttcagggcctccctcggtgata
cggtcaggctctggaaatctttagaacagacgaaagactatgaactgctgagagcatcaa
cagagaaatttgttcttgatccttttaaggcaaagacaatgaaggatgtcagtgaccttt
cagaccttgtagagatgcaggagatgatgatccattgtgtgcaagatgcatctggttgca
gcagctatgaaattcctgctatcaaaaacctccgaaaactagaatttgcgctgggtccag
tatgtggccttcagggattcctaaaactggtggaaattcttgcagcatttccatcacttc
agcacttagagtga
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