Enterobacter huaxiensis: D5067_0002835
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Entry
D5067_0002835 CDS
T08129
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ehu
Enterobacter huaxiensis
Pathway
ehu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5067_0002835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehu03019
]
D5067_0002835
03009 Ribosome biogenesis [BR:
ehu03009
]
D5067_0002835
Enzymes [BR:
ehu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D5067_0002835
Messenger RNA biogenesis [BR:
ehu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D5067_0002835
Ribosome biogenesis [BR:
ehu03009
]
Prokaryotic type
rRNA helicases
D5067_0002835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UNC48562
LinkDB
All DBs
Position
574608..576503
Genome browser
AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDSDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQTFWSVHGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNADLLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPTAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRNDRGPRGDRPER
GGEDRPRRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHST
IELPKGMPGEVLQHFTRTRILNKPMNMQLMGDAQPRTDRGGERRGGGRSFGGERREGGRS
EGRGEPRRFSGERRESRGPRRDDSSTRRRDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctctctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcattc
tcgctgccgctgctgaacaacattgattcggacctgcgtgcaccgcagatcctcgtcctg
gctccaacccgtgaactggctgttcaggttgctgaagcaatgacggaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtactctggatctctctaagctgagcggtctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccggaaggt
caccagaccgctctgttctctgcaaccatgccagaagcaatccgtcgcattacccgccgc
ttcatgaaagagccgcaggaagtgcgcattcagtccagcgttaccactcgcccggatatc
agccagacattctggtctgtacacggaatgcgtaaaaacgaagcgctggtacgtttcctg
gaagcagaagattttgatgcggcgatcatcttcgtacgtaccaaaaacgcgaccctggaa
gtggctgaagccctggagcgtagcggctacaacagcgcagcgctgaacggcgacatgaac
caggccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatattctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgtaaactac
gacatcccaatggattctgagtcttacgttcaccgtatcggtcgtaccggtcgtgcgggt
cgtgcgggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatt
gaacgcaccatgaagctgaccattccagaagctgacctgccaaacgcagatctgctgggc
aaacgccgcctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgtgcactgctgtcgcagattcagcctaccgctgaaggcgaagagctggac
atggaaaccctggctgcagcactgctgaaaatggctcagggcgaacgtagcctgatcgtg
ccaccagatgcgccaatgcgtcctaagcgtgaattccgtgaccgtgacgatcgtttcgaa
cgtcgtggcgaccgtaatgaccgcaatgaccgtggcccacgcggtgaccgtccagagcgt
ggtggtgaagaccgtccacgtcgcgagcgtcgtgacgctggcgaaatggaactgtaccgc
attgaagttggccgtgatgacggtgtggaagttcgtcatatcgttggcgcgatcgctaac
gaaggcgacatcagcagccgttacattggtaacatcaagctgttcggtactcactccacc
atcgaactgccaaaaggcatgccgggcgaagtactgcagcactttacgcgtactcgtatc
ctgaacaagccgatgaacatgcagctgatgggtgatgcacagcctcgcactgaccgcggc
ggcgaacgtcgtggcggtggccgcagcttcggtggcgaacgtcgtgaaggcggtcgtagc
gaaggtcgtggtgaaccacgtcgtttctcaggcgaacgccgtgaaagccgtggcccacgt
cgtgacgacagctcaacccgtcgccgtgacgcgtaa
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