Enterobacter huaxiensis: D5067_0004770
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Entry
D5067_0004770 CDS
T08129
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ehu
Enterobacter huaxiensis
Brite
KEGG Orthology (KO) [BR:
ehu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ehu03009
]
D5067_0004770 (rlmD)
Enzymes [BR:
ehu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
D5067_0004770 (rlmD)
Ribosome biogenesis [BR:
ehu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D5067_0004770 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
RrnaAD
MTS
PCMT
Methyltransf_11
Cons_hypoth95
Methyltransf_4
UPF0020
TRM5-TYW2_MTfase
Methyltransf_12
Methyltr_RsmB-F
Ubie_methyltran
Methyltransf_15
Methyltrans_SAM
Methyltransf_23
FtsJ
Methyltransf_32
TPMT
PrmA
CMAS
Motif
Other DBs
NCBI-ProteinID:
UNC48917
LinkDB
All DBs
Position
975451..976749
Genome browser
AA seq
432 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVEATDLDPFGQGVARHNGKALFITGLLPGERAEITLTEDKRQ
YARGQVKRRLNDSPERAVPLCPHFGVCGGCQQQHASVDLQQKSKSSALARQLKHEVNAII
ADQPWGYRRRARLSLSYQPKTERLDMGFRKAGSSDIVTIKRCPILVPQLEALLPDVHFCL
SGLEGVRHLGHVELVLANNGPLMVVRHTAPLTKKDREKLERFSHSHELALFLAPQSEILE
QVTGDAPWYASNGLRLTFSPRDFIQVNDGVNQQMIEQALSWLDVQKSDRVLDLFCGMGNF
TLPLAQKAASVVGVEGVEALVAKGRENARQNGLQNVTFFHQNLEDDVTQQPWAKQGFDKI
LLDPARAGAPGVMAHIIKLAPKRVVYVSCNPATLARDSEALISAGYQIQRLAMLDMFPHT
GHLESMALFEHI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaagcgacgcgtgacgacgcgtcagatcataactgttgaa
gccactgaccttgacccctttggtcagggggttgcacgtcacaacggcaaggccttgttt
ataacaggtttgctgcctggagaacgagcagaaattaccctgacggaagataaacgccag
tatgcgcgcggccaggtgaagcgtcgactcaacgacagccctgaacgcgcggtccctctc
tgcccccattttggcgtctgcggagggtgtcagcaacagcacgccagcgtagatttacag
caaaaaagtaaaagcagcgcgctggcgcgtcagcttaagcacgaggttaacgccattatc
gccgaccagccctggggctaccgccgtcgtgctcgtctgagcctcagctaccagcctaag
acggagcggctggatatggggtttcgtaaagccggctccagcgacattgtcacgataaag
cggtgccccattttggtgccccaacttgaggcattgctcccggacgtgcacttctgtctg
tccgggctcgaaggggttcgccatcttgggcacgtcgagctggttctggccaacaatggc
ccgctgatggtcgtgcgtcatactgcgcctcttacgaaaaaagaccgtgaaaaactggaa
cgcttttcgcattctcacgagctggcgcttttccttgcgccacaaagcgagatacttgag
caggttacgggagacgccccctggtatgcgtcaaacgggctacgcttaacgttcagccca
agagatttcattcaggtaaacgacggcgtgaatcagcagatgattgaacaagcgttgtcg
tggctggatgtacaaaagagcgatcgggtgctggatctgttctgcgggatgggtaacttc
acgctgccgttggcgcagaaagcagccagcgtggtgggtgttgaaggcgttgaggcgctg
gtggctaaagggcgggagaacgcgcgacagaacggtttgcaaaatgtgacattctttcat
caaaaccttgaggatgatgtcactcagcagccgtgggcgaaacaggggtttgataaaatt
ttgctcgacccggcacgtgctggtgccccgggcgtaatggcacatattattaagctcgcg
ccgaagcgtgtggtctatgtttcctgtaacccggcgacgcttgcccgagacagcgaggca
ttaatcagtgcgggttaccagattcagcgtctggcaatgctggacatgttcccgcacact
ggacatctggaatcgatggcgttgtttgagcacatctaa
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