Enterobacter huaxiensis: D5067_0008570
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Entry
D5067_0008570 CDS
T08129
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ehu
Enterobacter huaxiensis
Pathway
ehu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ehu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
D5067_0008570 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehu03400
]
D5067_0008570 (sbcB)
Enzymes [BR:
ehu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
D5067_0008570 (sbcB)
DNA repair and recombination proteins [BR:
ehu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
D5067_0008570 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D5067_0008570 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D5067_0008570 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UNC49621
LinkDB
All DBs
Position
complement(1787041..1788465)
Genome browser
AA seq
474 aa
AA seq
DB search
MSDSAARPTFLFHDYETFGTHPALDRPAQFAAIRTDEDFNIIGEPEVFYCKPADDYLPQP
VAVMVTGITPQEARDKGVNEAEFARRIHDLFTVPNTCVVGYNNIRFDDEVTRNIFYRNFY
DPYAWSWQNRNSRWDLLDIMRACYALRPEGISWPENEEGLTSFRLEHLTRANGIEHSNAH
DAMADVYATIAMAKLVKTAQPRLFEYLLGHRSKQKLTTLIDVPQMKPLVHISGMFGAWRG
NTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKNELGDLPAVPVKLV
HINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRDHPQVREKVVAIFAEAEPFVPSE
NVDAQLYNGFFSDADRAAMNIVLQTEPRNLPALDITFVDKRIDKLIFNYRARNYPGTLDE
AEQERWLQHRRNVFTPEFLSSYAQELEMLYGQYEGNAEKQALLKSLFQYAQEIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgattctgccgcgcgtcccacatttttattccacgattacgaaacctttggcacc
cacccggcgctggaccgaccggcgcagttcgccgccatccgtaccgatgaagacttcaac
atcattggcgaaccggaggtgttttactgcaaacccgccgatgactatctgccgcagccc
gtcgcggtgatggtaacgggcattacccctcaggaagcgcgggacaaaggggttaacgag
gcagagttcgcccgccgtatccacgatctcttcaccgttcccaatacctgcgtggtgggt
tacaacaacatccgttttgacgatgaagtgacgcgtaatatcttctaccgcaacttctac
gatccctatgcctggagctggcagaaccgtaactcgcgctgggatttactcgacatcatg
cgcgcctgctatgcgctgcgccctgagggcattagctggccggaaaatgaggaagggctg
acgagcttcaggctggaacacctgacgcgcgcaaacggcatcgaacacagcaatgcccac
gacgcaatggcggacgtctacgccactatcgccatggcgaagctggtcaaaacggcgcag
ccgcgcctgtttgagtacctgctgggccaccgcagcaagcagaagctgacgaccctgatc
gacgtgccgcagatgaaaccgctggtgcatatctccggcatgttcggcgcatggcgcggc
aataccagctgggtcgccccgctcgcctggcatcccgataaccgtaacgcggtgattatg
gtcgatctcgccggtgatatatcgccgctgctggagctcgacagcgatacgctgcgcgag
cggctctataccccaaaaaatgaactcggtgacctgcccgccgtgccggtcaaactggtg
catatcaacaaatgcccggtgctggcgcaggccaacacgctgcgtcctgaagatgccgac
aggctcggcattaaccgacagcactgtctggataatctgaaggtgctgcgcgaccacccg
caggtgcgcgagaaagtcgtggctatctttgccgaagccgagccgtttgtgccgtctgaa
aatgtcgatgcgcagctctataacggctttttcagcgatgccgaccgcgcggccatgaac
atcgttcttcaaaccgagccgcgtaacctgccggcgctggatatcaccttcgtggataaa
cgcatcgacaaattgatatttaactatcgtgcgcgaaactatcccggcacgctggacgaa
gcagagcaggagcgctggctgcagcatcgtcgtaacgtctttacgccagagttccttagc
agctatgcccaggagctggaaatgctctacggccagtatgaagggaatgctgagaaacag
gcgctgttgaaatccctgttccagtacgcgcaagaaattgtctga
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integrated database retrieval system
