Enterobacter huaxiensis: D5067_0010420
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Entry
D5067_0010420 CDS
T08129
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ehu
Enterobacter huaxiensis
Pathway
ehu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ehu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D5067_0010420 (pdeR)
Enzymes [BR:
ehu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
D5067_0010420 (pdeR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
UNC49963
LinkDB
All DBs
Position
complement(2163291..2165282)
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AA seq
663 aa
AA seq
DB search
MMDDLEPNLLFRYMGTHSPWWRLTADSNALHLAASESTDVIQVVALDDEQADLVRQLTVI
TSSISMTLSLYGVDVPVHLVGRKINKKEWAGTASAWNDTPSVARDLAQGLSFAEQVVSEA
NSVIVILDQHGNIQRFNRLSEEYTGLKEQEVIGQNVFKLFMSRSEAAASKRNITGFFRNG
SSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHELISDAINARGETQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLDEGQTLARLGGDEFIVMATDTSQGSLEAMASRILTRLRQPFRIGLIEIYTGCSLGI
ALAPHHGNDRESVIRNADTAMYTAKENGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDKD
QLLIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLNFEYCPIDVELTESCLIENE
ELALSVIQQFSRLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDIHKQSISQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWIKRYQAR
NMR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgatctggaaccgaatttgctgtttcgttacatgggcacgcacagtccatgg
tggcggttaacggcagacagcaacgcattgcatctcgctgccagcgagagcacggacgtt
atccaggttgtggcattagacgatgagcaggccgatctcgttcgccagctaaccgtcatt
acttccagcatctcaatgaccctgtccctgtacggcgttgatgtacccgttcatctggtc
gggcgcaaaattaataaaaaagagtgggcaggcacggcctctgcgtggaacgatacccct
tccgttgcccgcgatctggcgcaaggtctctcctttgctgagcaggtcgtctcagaggcc
aattccgttatcgtcatcctcgaccagcacggcaatatccagcgtttcaaccggctgagt
gaagagtataccgggctaaaagagcaggaagttatcgggcaaaacgtcttcaagctattt
atgagccgcagcgaagcggcagcatccaaacgcaacattaccggattttttcgcaacggc
agctcttacgaagtcgaacgctggatcaagacgcgaaaaggacaacgcttgtttctgttc
agaaacaagtttgtgcacagcggcagcggcaaaaatgaaattttccttatctgttcaggc
actgatatcactgaagagcgccgcgctcaggagcgtctgcgcgtgctggcgaataccgac
accattaccgggctgccaaaccgaaacgcgatccacgaactgatttccgatgcgatcaat
gccaggggtgaaacacaggtaggggtggtttatctcgacctggacaatttcaaaaaggtg
aacgatgcctacggacatatgttcggggatcagctgctccaggccgtcgccctggctatt
ttaagctgtcttgatgaaggacagacgctggcccgcctgggcggagatgagtttatcgtt
atggctaccgatacctcacagggatcgctggaggccatggcgtcacgtattctgacccgc
ttgcgtcaaccgttccgtattggtttgattgagatatacaccggctgctcgttggggatc
gccctcgcgccgcatcatggtaacgatcgcgagagcgtgattcgaaatgccgataccgcc
atgtatacggcgaaagagaacggacgcgggaaattttgcgtcttctcaccggagatgaac
cagcgggtgtttgaatacctttggctggataccaacctgcgcaaagccctggataaggat
cagcttttaatccactaccagccgaaaataacctggcgcggcgaggtgaggagtcttgaa
gcgctggtgcgctggcaatctcccgagcgtggcctgatccctcccctggaatttatctcc
tacgcagaagagtcgggcctgatcgtgccgcttgggcgctgggtgatgctggatgtggtc
cgtcaggtggctaaatggcgcgacaaaggcatcaaccttcgcgtggcggttaacgtctca
gcccggcagctggccgaccagacaatttttagcgaccttaagcaggcgctaaaagacctg
aattttgaatactgccctatcgatgttgaattaacggaaagctgtctcattgaaaacgag
gaactggcgctctctgtgatccagcagttcagccgccttggcgcgcaaatccaccttgat
gattttggcaccgggtattcgtccctgtcgcaactggcccgctttcctatcgacgccatc
aagctcgatcagtcttttgtccgggatatccacaagcagtctatctcgcagtctctggtt
cgtgcgattgtcgccgtagcgcaggcgctgaatttgcaggtgattgcggaaggcgttgag
agcgctaaagaggacgcctttctgaccaagaatggcgtcaacgagcggcagggttttctg
tttgctaagcccatgcccgctgccgcgttcgagcgctggataaagcgctatcaagccaga
aatatgcgttag
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