Enterobacter huaxiensis: D5067_0010425
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Entry
D5067_0010425 CDS
T08129
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ehu
Enterobacter huaxiensis
Brite
KEGG Orthology (KO) [BR:
ehu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehu03016
]
D5067_0010425
Enzymes [BR:
ehu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
D5067_0010425
Transfer RNA biogenesis [BR:
ehu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D5067_0010425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Rho_RNA_bind
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
UNC49964
LinkDB
All DBs
Position
complement(2165606..2167540)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
TAVIHTEKERESAEPEALIEPFLTRFVGKVHKKDDRLSIVPDHPLLKDAIQCRADRGVEH
EFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLARHNLEKEAPNGVAT
EMLDEGLARRDLTALDFVTIDSASTEDMDDALYVEEATDGKLLLTVAIADPTAWIAEGSK
LDDMAKVRSFTNYLPGFNIPMLPRELSDDLCSLRPNELRPVLACRMTIAADGTIEDEIEF
FAATIESKAKLAYDDVSDWLENTGSWKPQSDAIAAQIRLLHRVCLNRSEWRKTHALVFKD
RPDYRFVLGEKGEVLNIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKTHDVHVDPEEVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIVKGESAARPQDDTTLQMAERRRLNRM
AERDVGDWLYARFLNDKAGTDTRFPAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQETGTVQIKGETVYKVTDVIDVNIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggcttccttgaagttgacggg
cagaaaagctatttcatcccgcctccgcagatgaaaaaagtcatgcatggcgatcgtatt
acggccgtcattcataccgaaaaggaacgcgaatccgccgagccggaagcacttatcgag
ccgttcctgactcgcttcgtgggtaaggtacataaaaaagacgaccgtctttctatcgtt
ccggaccatcccctgctgaaagatgcgattcagtgccgtgcagatcgtggcgttgagcat
gaatttaaagagggtgactgggccgtagctgaaatgcgccgtcaccccctgaaaggcgat
cgcggtttctatgctgaactgactcagttcatcacctttggcgacgatcatttcgtgccg
tggtgggtaacgctggcgcgccacaatcttgagaaagaggctcccaacggcgttgcaaca
gaaatgctggacgaaggccttgcgcgtcgcgatctgacggcgctggactttgtcaccatc
gatagcgccagcaccgaagatatggatgatgcgctgtatgttgaagaggctacagacggc
aaactgctgctgaccgttgccattgctgacccaaccgcgtggattgcggaaggcagcaag
ctggacgatatggctaaagtgcgttcgttcaccaactacctgccgggcttcaacatcccg
atgctgccgcgcgaactctcagacgacctctgttcactgcgtccgaatgaactgcgtccg
gtgcttgcctgtcgcatgacaatcgcagccgacggtacgattgaagacgagattgaattc
ttcgctgcgaccatcgaatccaaggccaagctggcctacgacgacgtttccgactggctg
gagaataccggcagctggaaaccgcagtctgacgctattgccgcccagattcgactgctg
caccgcgtgtgcctgaatcgcagcgagtggcgaaaaacccatgcgctggtctttaaagat
cgtccggactaccgcttcgtgttaggcgaaaaaggcgaagtgctgaacatcgtggctgaa
ccgcgtcgcatcgctaaccgcatcgttgaggaagccatgatttccgccaacatttgtgcc
gcacgggtattgcgcgacaaattaggtttcggcatctataacgtgcacaccgggtttgac
ccggcgaacaccgaagcgctggccgccctgttgaaaacgcatgacgtacacgtcgatcct
gaagaggtactgacgctgccgggcttctgcaaacttcgtcgcgaactggatgcacaaccc
tccggtttcctcgacagccgcattcgccggttccagtcctttgctgaaatcagcactgag
ccaggcccgcacttcggcctgggcctggaagcctacgcaacctggacctctccgattcgt
aaatacggcgacatggtcaaccaccgtctgctgaaagcgatcgttaaaggggaatccgct
gcgcgtcctcaggacgataccacgctgcagatggcagagcgtcgtcgcctgaaccgcatg
gccgagcgcgatgtcggtgactggctgtacgcgcgcttcctcaatgacaaggcaggaacg
gacacccgcttcccggctgaaatcatcgacatcagccgtggcggtatgcgcgtgcgcctg
gtggacaacggtgctgtagcctttattccagcgccattcctgcacgccgttcgcgatgaa
ctggtctgtagccaggaaacgggtacggtgcaaatcaaaggtgaaacggtttacaaagtc
acggatgtgattgatgtgaacatcgccgaggttcgcatggaaacccgcagcattatcgcg
cgccctgtcgcctga
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