Enterobacter huaxiensis: D5067_0015930
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Entry
D5067_0015930 CDS
T08129
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ehu
Enterobacter huaxiensis
Pathway
ehu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5067_0015930 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehu03019
]
D5067_0015930 (rhlE)
Enzymes [BR:
ehu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D5067_0015930 (rhlE)
Messenger RNA biogenesis [BR:
ehu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D5067_0015930 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
DUF6482
P-loop_SecA
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UNC51007
LinkDB
All DBs
Position
complement(3307931..3309331)
Genome browser
AA seq
466 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQKQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
ELLEKNQPHAKGRRPVRALILTPTRELAAQIGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRSGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK
RQNLLFSATFSDEIKGLAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI
ERLLKKEIPRIALEGYEVDQSIKAEPIQNGRQGGGRGQGGGRGQGGGGRGQQPRRSEGGA
PKSSAGPARRGNDAKPAGENPWRSGDARPAGEGQRRRRPRKPANSQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaacccagaaattctgcgcgctatcgcagaacagggc
tacgttgagccaaccccgatccagaagcaggcgatacctgccgttctggaaggccgcgac
ctgatggccagcgcccagaccggtaccggtaaaactgcaggctttacgctgccgctgtta
gagctgctggaaaaaaaccagccgcatgcgaagggccgtcgtccggtgcgtgcactgatc
ctcacgccaacccgcgaactggcagcgcagattggtgagaacgtgcgtgagtacagccgc
tatctcaacattcgttcgctggtggtcttcggcggcgtcagcatcaacccgcagatgatg
aagctgcgcagcggcgtcgacgtgttggtggcgacgccgggtcgtttactggatctcgaa
catcagaacgcggtgaagctggatcaggttgaaattctggtgctggatgaagccgaccgt
atgctggacatgggctttatccatgatatccgccgcgtgctgacaaagctgcctgccaaa
cgtcagaacctgctgttctccgccaccttctctgatgagatcaaaggcctggctgaaaaa
ctgctgcgtaacccgctggaaattgaggttgcgcgccgcaataccgcttccgagcaggtg
acccagcacgttcacttcgtggacaaaaagcgcaaacgggagctgctgtctcagatgatt
ggcgaaggtaactggcagcaggtgctggtctttacccgtaccaagcacggcgctaaccac
ctggctgaacagctgaacaaggatggtatccgcagcgcggctatccacggtaataagagc
cagggtgctcgtactcgcgcgctggctgattttaaatcgggtgacattcgcgtgctggtc
gcaaccgacatcgcggcgcgtgggctggacattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagattacgttcaccgcattggtcgtaccggccgcgcggcg
gcgaccggtgaagcgctgtctctggtgtgcgtcgatgagcacaagctgctgcacgatatc
gaacgcctgttgaagaaagagatcccgcgcattgctctggaagggtatgaggtagaccag
tctatcaaagccgaaccgattcaaaacggtcgccagggcggcggtcgcggtcagggcggt
ggccgtggtcagggtggcggcggacgcggccagcagccgcgtcgttctgaagggggcgcg
ccaaaatcatcagccgggcctgcgcgtcgcggcaatgatgccaaaccggcgggtgaaaac
ccatggcgcagcggtgacgcgcgcccggcaggggaaggacagcgccgacgccgtccgcgc
aaacctgctaattcacagtaa
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