Enterobacter huaxiensis: D5067_0018745
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Entry
D5067_0018745 CDS
T08129
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ehu
Enterobacter huaxiensis
Pathway
ehu03030
DNA replication
ehu03430
Mismatch repair
ehu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ehu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D5067_0018745 (dnaE)
03430 Mismatch repair
D5067_0018745 (dnaE)
03440 Homologous recombination
D5067_0018745 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehu03032
]
D5067_0018745 (dnaE)
03400 DNA repair and recombination proteins [BR:
ehu03400
]
D5067_0018745 (dnaE)
Enzymes [BR:
ehu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D5067_0018745 (dnaE)
DNA replication proteins [BR:
ehu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D5067_0018745 (dnaE)
DNA repair and recombination proteins [BR:
ehu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D5067_0018745 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UNC51515
LinkDB
All DBs
Position
complement(3886652..3890134)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGTVHGV
GMKPIVGADFHVQSELLGDEMSQISVLAMNNTGYQNLTLLISKAYQRGYGAQGPWIDRDW
LAELNEGLLLISGGRMGDVGKCLLRGNSALVDQCVSFYEEHFPDRYYLELIRTGRADEEN
YLHAAVALAEERGLPVVATNDVRFLEAGDFDAHEIRVAIHDGFTLDDPKRPRNYSSQQYM
RSEDEMCELFSDLPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVVKSKEGL
EERLEFLFPDEAERNEKRPPYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGARKNGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNEHGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYSNCQPWPEQVVLDGERETLGLY
LTGHPINQYIKEIERYVGGNRLKDMHPTDRGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQHLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgatcgatggg
ctggcaaagaccggaccgcttgtgaaaaaggcggccgcgcttggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggcctggtgaagttctacgggacggtgcacggcgtg
gggatgaaacctatcgtcggtgcggattttcacgtgcagagcgagctgctcggcgatgaa
atgagccagatttccgtgctggcgatgaacaacacgggttatcagaaccttaccctgctt
atctcaaaagcctatcagcgcggctatggcgcgcaggggccgtggatcgacagagactgg
ctggccgagctgaatgaaggcctgctgctgatctccggcggccgcatgggtgacgtcggc
aaatgcctgctgcgcggcaacagcgcgctggtggaccagtgcgtgtcgttctacgaagaa
catttcccggatcgctattaccttgagctgatccgcaccggacgcgccgacgaagaaaac
tacctgcatgcggcggtcgcgcttgcggaagagcgcgggctgcccgtcgtggcgacgaac
gatgtacgtttccttgaagcgggcgattttgacgcgcatgaaattcgcgtggcgatccat
gacggctttacgctcgacgatccgaaacgtccgcgtaactactcctcgcagcagtacatg
cgcagcgaagacgagatgtgcgagctcttctccgatctcccggaagcgcttgaaaacagc
gttgagatagcgaagcgctgtaacgttaccgtgcgcctgggtgaatacttcctgccacag
ttcccgacaggcgatatgaccacggaagatttcctggtggtgaaatcgaaagaagggctt
gaggagcgtctggaattcctgttcccggatgaagccgaacgtaacgagaaacgaccgccg
tacgacgaacgtctggatattgaactccaggtgatcaaccagatgggcttcccgggctac
ttcctgatcgtaatggaatttatccagtggtcgaaggataacggtgtgccggtaggcccg
ggccgaggctccggtgcaggctcgctggtggcctacgcgctgaaaatcaccgacctcgat
ccgctggaatttgacctgctgttcgaacgtttccttaacccggaacgtgtctccatgccc
gactttgacgtcgacttttgtatggaaaaacgcgaccaggttattgagcacgtagcggac
atgtacggccgtgatgcggtatcacagattattaccttcggtacgatggcggcaaaagcg
gtaatccgcgacgtgggccgcgtgctggggcatccttacggttttgtcgatcgcatctct
aagctggtgccgcccgatccggggatgaccctggcgaaagcctttgaagccgagccgcag
ctgcctgaaatttacgaggccgacgaggaagttaaagcgctgatcgacatggcgcgcaag
ctggaaggcgtcacgcgtaacgccggtaagcacgcagggggcgtggttatcgccccgacc
aaaatcaccgacttcgcaccgctgtactgcgatgaagcgggccagcacccggttactcag
ttcgataagaacgacgtggaatacgccgggctggtgaagttcgacttcctcggcctgcgt
acgctgacgatcatcgactgggcgctaaagatgatcaacccgcgccgggaaaagcagggc
cttgagccaatagacattgctgccatcccgctggatgacaaaaaaagtttcgacatgctg
cagcgctcggagacgacggccgtcttccagcttgaatcccgcggcatgaaagatctcatt
aagcgcctgcagcctgactgcttcgaagatatgatcgccctggtggccctgttccgtccg
ggcccgctgcagtcagggatggtagataactttatcgaccgtaagcacgggcgcgaagag
atttcctacccagacgttcagtggcagcacgaatgcctgaaaccggtactggagccaacc
tacggcatcatcctgtatcaggaacaggttatgcagattgcccaggtgctctctggctac
acccttggcggcgcggacatgctgcgtcgagcgatgggtaagaaaaagccggaagagatg
gccaagcagcgcggcaccttcgaagaaggcgcgagaaaaaacggtattgacggcgaactg
gcgattaaaatctttgaccttgtagagaaatttgcgggttatgggtttaacaaatctcac
tctgccgcctatgctttggtctcgtatcagacgctgtggctgaaggcgcactatccagct
gagtttatggcggcggtaatgaccgccgatatggacaacaccgagaaggtcgttggcctt
gtggacgagtgctggcgcatggggctgaagatcctgccgccggacattaactcaggcctg
taccatttccacgtcaatgaacacggggaaatcgtttacggtatcggcgcgatcaaaggc
gtgggtgaggggcctattgaggcgatcatcgaggcgcgtaacaacggcggttacttccgc
gagctgttcgatctgtgcgcccgtaccgacaccaaaaagctgaaccgccgcgtgctcgaa
aaactgatcatgtccggcgcgttcgacaggctgggcccgcaccgcgccgcgctgatgaac
tcgctcggtgatgcgctgaaagcggcggatcagcacgcaaaagcggaagccataggccag
gcggatatgtttggcgtgctggcggaagagccagagcagattgagcagtcctattctaac
tgccaaccctggccagaacaggtggtgctggatggtgaacgtgaaacgttaggcttgtac
ctgacggggcacccaatcaaccagtacattaaggaaattgagcgctatgtcggcggcaac
aggctaaaagacatgcatccgacagatcgtggtaaaatcaccacggctgcggggctcgtg
attgctgcaagggtaatggtcaccaagcgcggcaatcgtatcggcatctgcacgctggat
gaccgttccgggcgtctggaggtgatgttgttcaccgacgcgctggataaataccagcat
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgtgaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcacgcgcgcggttgcgctttggtgcaacgtggcgtgtctctccgagcgat
cgtttactgaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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