Enterobacter huaxiensis: D5067_0022100
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Entry
D5067_0022100 CDS
T08129
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ehu
Enterobacter huaxiensis
Pathway
ehu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ehu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D5067_0022100 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehu03021
]
D5067_0022100 (rpoB)
03400 DNA repair and recombination proteins [BR:
ehu03400
]
D5067_0022100 (rpoB)
Enzymes [BR:
ehu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D5067_0022100 (rpoB)
Transcription machinery [BR:
ehu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D5067_0022100 (rpoB)
DNA repair and recombination proteins [BR:
ehu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D5067_0022100 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
UNC52138
LinkDB
All DBs
Position
complement(4603390..4607418)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALQYTTEQILDLFFEKVIFEIRDNKLQME
LVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDDIKLIEVPVEYIAGKVAAKD
YVDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGAYMSETIRVDPTTDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFEEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVAGGIEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGTDVRQKVDLNTFSDDEVLRLAENLRKGMPIATPVFDGAKEAEIKELLQ
LGGLPSSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggacattccatatctcctttctatccagcttgattcgttccagaagtttatcgag
caagatcctgaagggcagtacggtctggaagcagccttccgctccgtgttcccgattcag
agctacagcggtaactccgagctgcagtacgtcagctaccgccttggcgaaccggtgttt
gacgttcaggaatgtcagatccgtggcgtgacctattccgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgttaaagacattaaagaacaa
gaagtctacatgggtgaaattccactcatgacagacaacggtactttcgtaatcaacggt
actgagcgtgttatcgtttcccagctgcatcgtagcccgggcgtcttcttcgacagcgat
aaaggtaaaacacactcttccggtaaagtactgtataacgcacgcatcattccttaccgt
ggttcatggctggacttcgagttcgatcctaaagacaacctgtttgtccgtatcgaccgt
cgtcgtaagctgcctgcaaccatcattctgcgtgcgctgcaatacaccactgaacagatc
ctggacctgttctttgagaaagtgatctttgaaatccgcgacaacaagctgcagatggag
ctggtgccggaacgtctgcgtggtgagaccgcgtcgttcgacatcgaagccgacggcaaa
gtgtatgtggaaaaaggtcgccgtatcaccgcgcgccacatccgccagctggaaaaagat
gatatcaaactcatcgaagttccggttgagtacattgcaggaaaagtagccgcgaaagat
tacgttgacgagtcaacgggtgagctgatctgcccagcgaacatggagctgagcctggat
ctgctggctaagctgagccagtctggtcacaaacgtatcgaaacgctgttcaccaacgat
ctggaccacggcgcgtatatgtctgagactattcgcgtcgacccaacgaccgatcgtctg
agcgcactggtagaaatctaccgcatgatgcgtcctggtgagccaccaacgcgtgaagcg
gctgaaagcctgttcgagaacctgttcttctccgaagaccgctacgatctgtccgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagacgacatcatcgaagtgatgaagaagctcattgatatccgtaacggtaaaggc
gaagtggacgatatcgaccacctcggtaaccgtcgtatccgttccgttggcgaaatggcg
gaaaaccagttccgcgtaggcctggttcgtgtagagcgtgcggttaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttctgca
gcagtgaaagagttcttcggttcaagccagctgtctcagttcatggaccagaacaacccg
ctgtctgagattacgcacaaacgtcgtatctctgcactcggcccgggcggtctgacccgt
gagcgcgcaggctttgaagttcgagacgtacacccgactcactacggtcgcgtgtgtcca
atcgaaacgcctgaaggtccaaacatcggtctgatcaactccctgtccgtgtacgcacag
actaacgaatacggtttcctcgagaccccgtaccgtaaagtgaccgacggtgttgtaacc
gacgaaattcactacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgacgaaggccactttgaagaagacctggtaacgtgccgtagcaaaggc
gaatccagcttgttcagccgcgaccaggttgactacatggacgtatccacccagcaggtg
gtatccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcaaacatgcaacgtcaggccgttccaactctgcgtgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgttactgcagttgctaagcgt
ggcggtaccgtacagtacgttgacgcatcccgtatcgttatcaaagttaacgaagacgag
atgtatccgggcgaagcgggtatcgacatctataacctgaccaaatacacccgttctaac
cagaacacctgtattaaccagatgccatgtgtgtctctgggtgagccaatcgagcgcggt
gacgtgctggcagatggtccatctaccgacctcggtgagctggcgcttggtcagaacatg
cgtgtagcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtatccgag
cgtgttgttcaggaagaccgtttcaccaccatccacattcaggaactggcatgtgtgtct
cgtgacaccaagctggggccagaagagatcaccgctgacatccctaacgtgggtgaagct
gcgctctccaagctggatgagtccggtatcgtttacatcggtgcagaagtgaccggtggc
gacattctggtaggtaaggttacgccgaaaggtgaaacccagctgacgccagaagagaag
ctgctgcgtgcaatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccaaacggtgtttccggtacggttattgacgttcaggtcttcacccgtgacggcgttgag
aaagacaaacgcgcgctggaaatcgaagagatgcagctcaagcaggccaagaaagacctg
tctgaagaactgcagatcctcgaagcgggtctgttcagccgtatctacgcggtactggtt
gccggtggcatcgaagctgagaagctcgacaaactgcctcgcgatcgctggctggaactg
ggcctgaccgacgaagagaaacaaaatcagctggaacagctggctgagcagtacgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgtaaaatcactcagggcgac
gatctggcaccgggcgtgctgaagatcgttaaggtttatctggctgttaaacgtcagatc
cagcctggtgataaaatggcaggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagacatcgtactgaaccca
ctgggcgtaccgtctcgtatgaacattggtcagatcctggaaactcacctgggtatggct
gcgaaaggtatcggcgacaagattaacgccatgctgaaacagcagcaggaagtcgcgaaa
ctgcgcgaattcatccagcgtgcctacgatctgggtaccgacgttcgtcagaaagtcgac
ctgaacaccttcagcgatgatgaagttctgcgtctggcggaaaacctgcgtaaaggtatg
ccaattgcaacgccggtattcgacggtgcaaaagaagctgaaattaaagagctgctgcaa
ctgggtggtctgccatcttctggtcagattacgctgtttgatggtcgcaccggcgagcag
tttgagcgtcaggtaaccgtaggttacatgtacatgctgaaactgaaccacctggtcgat
gacaagatgcacgctcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggctcagttcggtggtcagcgcttcggggagatggaagtgtgggcgcttgaagca
tacggcgcagcatacaccctgcaggaaatgctcaccgttaagtctgatgacgttaacggt
cgtaccaagatgtataaaaacatcgtggacggtaaccatcagatggaaccgggcatgcca
gaatccttcaacgtactgttgaaagagattcgttcgctgggtatcaacatcgaactggaa
gacgagtaa
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integrated database retrieval system
