Emiliania huxleyi: EMIHUDRAFT_101170
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Entry
EMIHUDRAFT_101170 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
ehx
Emiliania huxleyi
Pathway
ehx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EMIHUDRAFT_101170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_101170
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
EMIHUDRAFT_101170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
17269493
NCBI-ProteinID:
XP_005776376
JGI:
Emihu1_101170
UniProt:
A0A0D3JKB2
R1CMX6
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MGWERSPVALRMSERIRADPLDTDAWRILLAEAARQPPADFRPVFEAAVTAMPEASAAWM
GWAEAELGASEVEQAEAVFELCLLRLPQLPLWHLFLKFVREHKVAQLERSAARAQLVPAL
ELLLEAVGADPSAGPLWTEYVSLTAAAEAGAEADGALVSAAELSATRKAYQAALTSCAAG
LDGLLREYEAWETRTSGSQAKAMMHDTLEKAAAARKAHFPPGVATPRLLAAWRKLWAYEA
SNAQRLDPPKLAARMRFALAQGAAALWRAPQLWHEAARWLEGEGNAPAAREVLRSPHRHP
LAAAALPSATPSLLAALAAAAAFAAAALTAAAAARGFEERQGKMDDAAALLDTLVAKAPS
AAAHAHSPWPVYAAAAQLEYMLGEERAAAAETGRRVYALALAKASETARDAEASAQAKGG
SVPAGLVLSYASYLRASADLPNLRAPPRAGRELLERGLLLLPAAEAAQLWPIYAQALALE
HSYEGTAPPSAAATLEMEAAVAALSSPGGAPRRGTAPQLSACTEYTGVEHRTQEKGGGGG
ASSAASVPIPPQLASWLAALPPPSLPLWHLFLKFVREHKVAQLERSAARAQLVPALELLL
EAVGADPSAGPLWTEYVSLTAAAEAGAEADGALVSAAELSATRKAYQAALTSCAAGLDGL
LREYEAWETRTSGSQAKAMMHDTLEKAAAARKAHFPPGVATPRLLAAWRKLWAYEASNAQ
RLDPPKLAARMRFALAQGAAALWRAPQLWHEAARWLEGEGNAPAAREVGLGGGVGAGGAS
KQKRAAAATQGGGRRVRDIYSQRAAAQAAQPVSVRPLQCSAVERRSTALEAPSPSMNAEV
RAHASKKWRSSPGLAGTATPARAASCDSAGMSCSGGVAVRRTRWAAGSATSASWSVVSDA
SSCASSKSSSHGGVPPISEGARLATCLKPPGVAIRISAAGRLLAPGSRRAVRRVGKSFAA
SLSHWCTKCAGQTTSVRVGVWPAKCTAASASAQAVLPKPTEWQSSAGEPSSTRV
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggggtgggagcgctctcccgtcgcgctccggatgtcggagcgcatccgcgcggacccg
ctcgacacggacgcgtggcgcatcctcctcgccgaggcggcccgccagccgcccgccgac
ttccgtcccgtgtttgaggcggcggtgacggcgatgcccgaggcgagtgcggcgtggatg
ggctgggccgaggcggagctcggcgcgtccgaggtggagcaggcggaggcggtcttcgag
ctctgcctcctccgcctgccgcagctgccgctctggcacctcttcctcaagtttgtgcgc
gagcacaaggtcgcgcagctcgagcggagcgcggcccgcgcgcagctggtgccggcgctg
gagctgctgctcgaggcggtaggtgcggacccgagcgcggggccgctctggaccgagtac
gtctccctcaccgccgccgccgaggcgggcgccgaggcggacggcgctctcgtctctgcc
gccgagctgtctgcgacgcgaaaggcataccaggcggcactcacctcgtgcgccgcgggg
ctggacgggctgctgcgcgagtacgaggcgtgggagacgcgcacctccggcagccaggcc
aaggcgatgatgcacgacacgctcgaaaaggcggccgccgcccgcaaggcgcactttcct
cccggcgtggcgacgccgcggctgctcgccgcgtggagaaagctgtgggcgtacgaggcg
tccaacgcgcagcggcttgacccgcccaagctcgccgcccgcatgcgttttgcgctggcg
cagggcgcggcggcgctgtggcgggcgccgcagctgtggcacgaggctgcgcgctggctc
gagggggaggggaacgcgcccgctgcgcgcgaggtgctgcgctcgccacatcgccacccc
ctcgctgctgctgccctcccctctgccactccctcactgctcgccgccctcgccgccgcc
gccgccttcgccgccgccgccctcaccgccgccgccgccgcgcgaggtttcgaggagcgg
cagggcaagatggacgacgccgcggcgctgctcgacacgctcgtcgcaaaggcgccgtcg
gcggcggcgcacgcgcacagcccgtggccagtgtacgccgccgcggcgcagctcgagtat
atgttgggcgaggagcgcgccgccgccgcagagacggggcggcgcgtgtacgcgctggcg
ctggccaaggcgagcgagacggcccgagatgcggaggcgagcgcgcaggcaaagggcggc
agcgtgcccgcggggctggtgctgtcgtacgcatcgtacttgcgggcgagcgcagacttg
ccgaacttgcgcgcgccgcctcgagcggggcgagagctgctcgagagggggctgctgctg
ctcccggccgcggaggcggcgcagctgtggccaatctacgcgcaggcgctcgcgctcgag
cactcgtacgaggggaccgcgccgccgtcggccgcggcgacgctcgagatggaggcggca
gtcgcggccctctcctctcccggcggcgccccgaggcgcgggacggcgccgcagctctcc
gcctgcacagagtacacgggcgtcgagcaccgcacgcaggagaagggcggcggcggaggg
gcttcctccgccgcgtcggtcccgatcccgccgcagctggcgtcttggctcgccgccttg
ccgccgccctcgctgccgctctggcacctcttcctcaagtttgtgcgcgagcacaaggtc
gcgcagctcgagcggagcgcggcccgcgcacagctggtgccggcgctggagctgctgctc
gaggcggtgggtgcggacccgagcgcggggccgctctggaccgagtacgtctccctcacc
gccgccgccgaggcgggcgccgaggcggacggcgctctcgtctctgccgccgagctgtct
gcgacgcgaaaggcgtaccaggcggcactcacctcgtgcgccgcggggctggacgggctg
ctgcgcgagtacgaggcgtgggagacgcgcacctccggcagccaggccaaggcgatgatg
cacgacacgctcgaaaaggcggccgccgcccgcaaggcgcactttcctcccggcgtggcg
acgccgcggctgctcgccgcgtggagaaagctgtgggcgtacgaggcgtccaacgcgcag
cggcttgacccgcccaagctcgccgcccgcatgcgttttgcgctggcgcagggcgcggcg
gcgctgtggcgggcgccgcagctgtggcacgaggctgcgcgctggctcgagggggagggg
aacgcgcccgctgcgcgcgaggtcgggctcggcggcggcgtcggcgccggcggtgcgagc
aagcagaagcgcgccgccgccgccacgcagggcggcggccgccgcgtgcgcgacatctac
tcgcagcgagccgccgcgcaagctgcgcagccggtgagcgtgaggccgctgcagtgctcg
gcggtcgagaggaggagcaccgcgctagaggcgccgtcgccctcgatgaacgcggaggtg
cgggcgcacgcgtccaaaaagtggcgcagctcgcccggcctcgccggcacggcgacaccc
gccagggccgcgagctgcgacagcgccggcatgtcttgcagcggcggcgtggccgtgagg
aggacgcgctgggcggcgggcagcgccacgagcgcctcgtggagcgtcgtgtccgacgcg
agctcatgcgcctcgtccaagagcagcagccatggcggcgtgccaccaatcagcgagggg
gcccgtctagccacctgcttgaagccccccggggtggcgatcaggatctcggccgccggg
aggctgctcgccccgggctcgaggcgcgcggtgcggcgggtcggcaaaagcttcgccgcc
tcgctctcccactggtgcaccaaatgcgccgggcagaccacgagcgtccgcgtcggggtc
tggccggccaagtgtacggccgcgagcgcgagcgcgcaggccgtcttgccaaagcccacc
gagtggcagagcagcgccggagagccctcgtcgacgcgcgtgtag
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