Emiliania huxleyi: EMIHUDRAFT_101352
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Entry
EMIHUDRAFT_101352 CDS
T02915
Name
(RefSeq) hypothetical protein
Organism
ehx
Emiliania huxleyi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
17267736
NCBI-ProteinID:
XP_005774618
JGI:
Emihu1_101352
UniProt:
A0A0D3JFA4
R1EMT4
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
MDRESAWSTLSGVGPLLHEACGIKFSFYTKREVERLSVCKVTSSRQRDVMNRPLANGLYD
ARMGPTDNWDTCVTCGLEYGLCPGHFGHIDLPLPTYTHLLFPLLHQLLRCACSACHHFRA
PRARLEPYAAALRLLDAGLLTDAAAVLESAAVVSGNSKLGNNQQRAAGEARLASRTARGS
CPACVPPTLRLSRLSGGGGVGGRVDERRLGGRASNKCTRCGRASGSLKARGGQVFFLLAP
LLSLLRTFPSSRRSTRNGSVAAAAAAASAVAANRTEGSDNDDDDEEEDDEEAEEVDEAAA
EAMEVDEATAERGTSQVGKSLFLNPTDARERMAALWEAESQLLGQLYPSLDADSFFQEFV
IVPPNRFRPPAKVGDQLFDHSQNVFLNKVLTAIETLHRIKQQKADQDAAAAGGQTAGGGN
GYGPMTDQRMMDRYLSAWDEMSLGVASMVDSTAGGGKADEKDAQGVKQMLERKARRSCSC
SRSLSRLRGRATGWAGGVPLHFATELTFPEPVTPWNVLRRAVVNGPHEHPGANFVQDADG
AMIDLRRRSRPQRVAIAARLLADADGGGGSVAGGELGGAQLLSPSLGGGLAAMTPKKAAA
AAGIPGITPGSGVPPSAGLGRSHVTGGVKKVWRHLVSGDAMLVNRQPTLHKPGIMAHSAR
VLRNEKVIRMHYANCNTYNADFDGDEMNLHLCQSHLARAEAYHIAATDHQYIVPTNGRPL
RGLIQDHVVMGVLLTKRDTFLTKSQYMQLLFLAGVDLSRGGGTFVTMPPTILKPAPLWTG
KQVISTLLRHLGAGALNCAFKAKTAGDTWARPSCAGYAGTGEPEENAVQILDGELLTGVL
DKAAFGATEFGLVHSVHELLGGEPAGQLLSQLGRLLTGYEQMHGHTCGIGDVMLTPAADE
RRRRLHATADGCGVSAAESFGKLAPGALAAAAAAGAGGSGSGGGVARAAFRQLLAEKLTE
ADKGDEAGAALDSAMKQALLPLASEVGAACLPSGMAVPFPRNQFAIMTQTGAKGSQVNFS
QIAVMLGQQELEGRRVPIGPSGATAPCFAPFELSARAGGYITDRFLTGVRPPEFYFHCMA
GREGLVDTAVKTSRSGYLQRCLIKHLEPLQVAYDHTVRNVVDGSVVSFVAGEDGLDPTRV
AFFGNQPFLAANAHALRAKWTPRHVPAASAGRLDAAAAHKRHAARLATPPEKRPILLERA
SPAACLGNTSLAFEESMEDFLARAAKDPASAVAAGRPAPAADVWREVVWHKYLDSLSPPG
EAVGLLAAQSVGEPSTQMTLNTFHLAGSGLAHAGTGLANVTLGIPRLREVIMVASRKPST
PLMTLSLLEAVQSAGGADAAAQEVRHRLERVTFAEVLQRVTAEERLRPEAAPAGGSAAEY
SRRVRLTLHFDPAAAGVQRVELLLPLVEQLLPSLKRAMAKHAAAASKGRKAVTSRAARRE
AAPAAAGGGDEDGGAAGGEGGEGERRGRSGDDDGGGDGDGGGGGDDDDDDARAAARAARR
SSADYDDEEDGGESGRASSPTGEEGEEGDEEEAEGAAAGSGGGASGGRSAAAAAEEASAE
RAFVTRLDALCRPGGSLVGAGVASDGLSGWIDCRMPARTARLQLVPLVEELAPKVVVRHT
EGITSAVVLPPPKGSKAPVIQTAGVNFGALASSRAMAAVVDLNKVRSNDIYAVLCTFGVE
AARATIVSEIKSVFGVYGIKVDPRHLALIGDYMTHEGGYTPLNRSGMETHVSPLLKMTFE
TTTHFLTQAATHGDPDPLTAPSAAIVLGKPVSCGTGAFGLRANLAASCRQ
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggacagagagtcggcctggtcgacgctttcgggcgtcggcccgctgctgcacgaggca
tgcggcatcaagttctccttctacaccaagcgtgaagtggagcgcttgtcagtgtgcaaa
gtgacctcgtcgcgacagcgcgacgtgatgaaccgaccgctggccaacgggctgtacgac
gcacgcatgggtccgaccgacaactgggacacctgtgtcacctgcggcctcgagtacggc
ctctgtccaggccactttgggcacatcgatctgccgctgccgacctacacgcacctgctc
ttcccgctcctccaccagctcctgcgatgcgcgtgctcggcgtgccaccacttccgtgca
ccgcgtgctcgtctcgagccgtacgccgccgcgctgcgcctcctcgatgccggcctcctc
accgatgctgccgcggtgctcgaatccgccgccgtggtcagcggcaactccaagctgggc
aacaaccagcagcgggcggctggcgaggcgcgcctcgcctcgcgaacggcgagaggctct
tgccccgcgtgcgtgcctccgactctgcgcctctcgcgcctctcaggtggcggaggagtc
ggagggcgcgtggatgagcggcgtctcggcggcagggcgtcgaacaagtgcacgcggtgc
ggtcgtgcctcgggcagcctcaaggcgcgcggcgggcaagtcttcttcctcctcgcacct
ctcctgagcctgctccgaactttccccagctcccgccgatcgacgcggaacgggagcgtg
gcggcggccgccgccgccgcgtcggcggtggccgccaatcgcactgagggcagcgacaac
gacgacgacgacgaggaggaggacgacgaggaggcggaggaggtggacgaggcggcggca
gaggcgatggaggtggacgaggcgacggcggagcgcggcacgtcgcaggtgggcaagtcc
ctcttcctcaacccgacggatgcgcgcgagcggatggcggcgctgtgggaggccgagtcg
cagctgctcggccagctctacccatcgctcgacgccgactccttctttcaggaatttgtc
atcgtgccgcccaaccggttccggccgccggcaaaggtgggcgaccagctgttcgaccac
tcgcagaacgtcttcctcaacaaggtcctcaccgcgatcgagacgctgcaccgcatcaag
cagcaaaaggccgaccaggatgcggcggcggcgggcgggcagacggcgggcggtgggaac
gggtacggcccgatgacggaccagcgaatgatggatcggtacctctccgcgtgggacgag
atgagcttgggtgtggcgtcgatggttgactccaccgctggcggcggcaaggccgacgag
aaggacgcgcagggcgtcaagcagatgctcgagcgaaaggcgcgccgctcctgctcctgc
tcccgctccctctcccggctgagagggcgggcgactggatgggcgggcggcgtcccgctg
cacttcgcgaccgagctcaccttccccgagcccgtcacgccgtggaacgtactgcgccgc
gcggtcgtcaacggcccgcacgagcacccgggcgcgaactttgtccaagacgcggacggc
gcgatgatcgatttgcgccgccgctccaggccgcagcgcgtcgccatcgccgccaggttg
ctcgccgacgccgacggcggcggcggcagcgtggccggaggggagctggggggggcgcag
ctcctctcgccgtcgctcgggggcggcctggcggccatgacgccaaagaaggcggccgcc
gccgcgggcattcccggcatcacgccgggcagcggcgtcccgccttcggccggcctcggc
cggtcgcacgtcacgggcggcgtcaagaaggtctggcggcacctcgtgagcggcgacgcg
atgctcgtcaaccggcagcccacgctgcacaagccgggcatcatggcgcactcggcgcgc
gtgctgcgcaacgagaaggtgatccggatgcactatgccaactgcaacacgtacaatgcc
gacttcgacggcgacgagatgaacctgcacctctgccagtcccacctcgcgcgcgccgag
gcataccacatcgccgccaccgaccaccagtacatcgtgccgaccaacggccgcccgctg
cgggggctcatccaggaccacgtcgtgatgggggtgctgctgaccaagcgcgacaccttc
ctcaccaagtcgcagtacatgcagctcctcttcctcgccggcgtcgacctctcgcgcggc
ggcggcaccttcgtcacgatgccgcccacgatcctcaagcccgcgccgctctggacgggc
aagcaggtcatctcgacgctgctccgccacctcggcgcgggcgcgctcaactgcgccttc
aaggcgaagacggcgggcgacacctgggcgcgcccgagctgcgccggctacgccggcacg
ggcgagccggaggagaacgccgtgcagatcctggacggcgagcttctcaccggcgtgctc
gacaaggccgccttcggcgcgaccgagttcgggctggtgcactcggtgcacgagctgctc
ggtggcgagcccgcggggcagctcctctcgcagctgggccgcctcctcaccggctatgag
cagatgcacggccacacctgcggcatcggcgacgtgatgctcacgcccgcggcggacgag
cggcggcgccgactacacgccaccgccgacgggtgcggcgtctcggccgccgagagcttc
ggcaagctggcgccgggcgcgctggcggccgccgcggcggcgggcgcgggcggcagcggc
agcggcggcggcgtggctcgcgcggcgtttcggcagctgctcgcggagaagctgaccgag
gcggacaagggcgacgaggcgggcgccgcgctcgactctgcgatgaagcaggcgctgctt
ccgctggcgtcggaggttggcgccgcttgcctgccctcgggcatggcggtgcccttcccg
cgcaaccagttcgccatcatgacgcagaccggcgcgaagggctcgcaggtcaacttctcg
cagattgcggtcatgctcgggcagcaggagctcgaggggcggcgcgtacccatcgggccc
tcgggcgcgactgcgccgtgcttcgccccgttcgagctctccgcgcgcgccggcggctac
atcacggaccgcttcctcaccggcgtgcggccgcccgagttttacttccactgcatggcg
gggcgcgagggcctcgtcgacacggccgtcaagacgtcgcgctcgggctacctgcagcgc
tgcctgatcaagcacctcgagccgctgcaggtcgcttacgaccacacggtgcgcaacgtc
gtcgacggctccgtcgtctccttcgtcgcgggcgaggacggcctcgacccgacgcgcgtc
gccttcttcggcaaccagcccttcctcgcggcgaacgcgcacgcgctgcgcgccaagtgg
accccgcgccacgtgccggcggcctcagccggccgcctcgacgcggcggcggcgcacaag
cggcacgcggcgcgcctcgccaccccgccggagaagcggccgatcctcctcgagcgggcc
tcgccggcggcgtgcctcggcaacacctcgctcgcctttgaggagtcgatggaggacttc
cttgcgcgcgcggccaaggaccccgcctccgccgtcgcggcgggccgccctgcgccagcg
gcggacgtgtggcgcgaggtggtgtggcacaagtacctcgactcgctctctccgcccggc
gaggcggtcggcctgctcgcggcgcagtccgtcggcgagccttcgacgcagatgaccctc
aacaccttccacctggcgggcagcggcctcgcccacgcgggcaccggcctcgccaacgta
actctgggcatccctcggctgcgcgaggtgatcatggttgcgtcgcgcaagccgtccacg
cccctgatgaccctctcgctcctcgaggcggttcagtctgccggcggcgccgacgcggcg
gcgcaggaggtgcggcaccgcctcgagcgcgtcactttcgcagaggtgctgcagcgcgtg
accgccgaggagcggctgcggcccgaggcggcccccgcgggcggcagcgccgcggagtac
agccggcgcgtgcgcctcaccctccacttcgacccggccgcggccggcgtgcagcgcgtg
gagctgctgctgccgctggtcgagcagctgctcccatcgctcaagcgggcgatggcaaag
cacgccgcagccgcctccaaggggcgaaaggcggtgacgagtcgcgccgcgcggcgggaa
gctgcgccggccgcggcgggcggaggcgatgaagatggcggggctgctggaggcgaaggc
ggcgagggcgagcgccgtgggcgcagcggggacgacgacgggggcggcgacggcgacggc
ggcggcggcggcgacgacgacgacgacgacgcgcgcgcagcggcgcgcgcggcgcggcgc
tcgagcgccgactacgacgacgaggaggacggtggtgagagcggtcgtgcgtcgtcgccg
acgggcgaggagggcgaggagggcgacgaggaggaggccgagggtgcggcggctggcagc
ggcggtggtgcatcgggcggtcggtcggccgcagctgcggcagaggaggcgtcggccgag
agggcttttgtgacgcgcctcgacgcgctctgccgaccgggaggctccctggtgggcgcc
ggcgtcgcgagcgacgggttgtcgggatggatcgactgccggatgccggcgcgcaccgcg
cggctgcagctggtgccgctcgtcgaggagctcgcgccaaaggtggtggtgcgacacacc
gagggcatcacttcggcggtggtgctcccgccgccaaagggctcgaaagcgccggtcatc
cagacggcgggcgtcaactttggcgcgctcgcgtcgagccgggcgatggctgccgtggtc
gacctgaacaaggtccgatccaacgatatctacgccgtgctctgcacttttggcgtcgag
gcggcgcgcgccaccatcgtctccgagatcaagtcggtcttcggcgtgtacggcatcaag
gttgaccctcgccacctcgcgctcatcggcgactacatgacgcacgagggcggctacacg
ccgctcaaccgctctggcatggagacgcacgtgtcgccgctgctcaagatgacgttcgag
acgacgacgcactttctcacccaggccgccacgcacggcgaccccgacccgctcaccgcg
ccgtccgccgccatcgtgctgggcaagcccgtctcgtgcggcacgggcgcctttgggctg
cgagccaatctggccgcgtcgtgccggcaatga
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