Emiliania huxleyi: EMIHUDRAFT_105607
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Entry
EMIHUDRAFT_105607 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
ehx
Emiliania huxleyi
Pathway
ehx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMIHUDRAFT_105607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_105607
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EMIHUDRAFT_105607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
17255482
NCBI-ProteinID:
XP_005761650
JGI:
Emihu1_105607
UniProt:
A0A0D3ID86
R1DEF1
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MSPGLPPEADGAAGAAAQPVQAAPSEAAGAAAFRRVHPLHYHQAFLAQGVRPDGRGLLRG
RRAAASAAVVSSADGSAMAKLGQTTVLAGVQAVPTLPSEAEPGEGRVVVTLDQPLAGGER
GGQARQEREQSALSELLQRSAAGMADGNLTDACLLAMLVALSDTALPAVRFSTGEGEGED
GTARAEEEALLSTSFTLLLDSDGAFRGLHKPGGAPLDEATTRESLAAARKRLPALVAASS
AKRAGLRF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctggcctgcccccagaggccgacggcgctgctggcgccgccgcgcagccggtc
caggcagcgccgtcagaagcggccggtgcggccgcgttccggagggtccacccgctgcac
taccaccaggcatttttggcgcagggtgtccgcccggacgggcgagggctgctgcgcggc
cgccgcgccgccgcgagcgcggccgtcgtgagcagcgccgacggctcggcgatggcgaag
ctcgggcagacgaccgtcctcgcgggcgtgcaggcggtccccacgcttccgtcagaggcg
gagccgggcgagggtagggtggtggtcacgctcgaccagcctctcgccggcggagagcga
ggcgggcaggcgcggcaggagcgggagcagagcgcgctgtcggagctgttgcagcgcagc
gccgctgggatggccgacggcaacctgacggatgcttgcttgctggcgatgctggttgct
ctgtcggacacggctttgccagcggtgcgattctcgacgggggagggggagggcgaggac
ggcacagccagggcggaggaggaggcgctgctgtcgacgtccttcacgctcctcctcgac
agcgacggcgccttccgtggactgcacaagccgggaggggcgccgctggacgaggcgaca
acgcgggagagcctcgccgcggcgcgcaagcggctgccggcgctggtggccgcgtcaagc
gccaagcgtgcggggctccgcttttga
DBGET
integrated database retrieval system
