Emiliania huxleyi: EMIHUDRAFT_107240
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Entry
EMIHUDRAFT_107240 CDS
T02915
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting 18
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ehx
Emiliania huxleyi
Pathway
ehx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
EMIHUDRAFT_107240 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ehx04131
]
EMIHUDRAFT_107240 (VPS18)
Membrane trafficking [BR:
ehx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
EMIHUDRAFT_107240 (VPS18)
Hops complex
EMIHUDRAFT_107240 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
zf_RING_Vps8
zf-RING_Vps41
Ogr_Delta
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
17251715
NCBI-ProteinID:
XP_005758006
JGI:
Emihu1_107240
UniProt:
A0A0D3I2U2
R1B8M9
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MPADSSAAAIVALDPAWRPAATESLRLAAAGDGVLYLLTSPSGGGGSSSGSAPSLRRLTL
ATGEEEVLELSRVSATPAGLFADPHSSTSVLIAHANGDTVYVHRSRSRVLGKARGLLITA
VAWLRPDPSRSDTREVLLGSSSGAIFEAALEPTRTSRYRQLFTLSPPAPLCGLAAEPFVS
QGAPDDKRLFVLAATPTRYYEFVGPASLEARPSPPPLASRLPLPARPLLRACTGHVEVEG
PPPGTAWPPPHKGSSLDFDRRRGQEGGGRGSGASPPSAFAWLSARGVYCGSLLFGAQAPR
DSCVYDSELHLLVLYGGGVAALSRLSGELMCVARPPAACGPLLGLVREPAQGGLWAWGEG
GTLRVSVNREERHMWRLHLEARDFETALACCSPGAPSQRDLVLAQHAEHELSRGAYTLAA
RQFAKTGRSVEEVALRFLSLGQKGAPSPPPPLLSAVAAPPPAPLPLSRGHRRLSRPTTYA
LLEAAGRHAELAHYAQLCGDHERLLLLHLERRQPAAAIAQLRSLLEAAGGGGGRAFPEAA
AAGTGGAGGSGGRPRAAPAPGRGRLADRRAELQRLVEQFAAELLSQAPAETVGLWLCAPF
LDPLPLLPALMRYDERRAAAGAAAGSAAGSPPHHGIRYLTRATAAGCRERDVHNYLLLLH
ARRSADPPLLAFLEGSAPPAGEAGGEVAAEAVGVGALATSGGATHYEPDYALRVCQRHGR
RAACVRLYQLRGDCAEAVSLALDSGEVCLAKQSANLLPAGSPLRRRLWLQIARRVLCGRR
SDSQYAQLEEAMEGAAAFAAPPGDEALRVRVREAVSLLEECPQLSIDLLLPLFPDFTQME
HLREIAEELRQEAEQLRSRRLEAPASQPCDSTELPSHVRARTCGGGALGGHRCVVFPCGH
AFRLRCLERARAAGHERVRLGRADAEALVAECPLCGSAMVASATKPLVDPVADAELLASW
AV
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgactcctctgccgctgcgatcgtcgccctcgacccggcgtggcgcccagcg
gccaccgagtcgctgcgccttgcggccgccggcgacggcgtcctctacctgctcacgtca
ccctctggcggcggcggcagcagcagtggcagcgcgccatcgctccgccggctgacgctg
gcgactggcgaggaggaggtgctcgagctgtcccgcgtcagcgcgacgccggccggcctg
tttgcagacccgcactcgtcgacgtcggtcctcatcgcgcacgcaaacggcgacacggtc
tacgtgcaccgctcgcgctcgcgcgtgctcggcaaggcgcgcgggctgctcatcaccgcc
gtcgcgtggctgcgacccgacccgtcgaggagcgacacgcgcgaggtcttgctcggctcc
tcgtcgggcgctatcttcgaggcggcgcttgagccgacgcgcacgtcgcgctaccggcag
ctcttcacgctctcgccgccggcgccgctgtgcggcctcgcggcggagcccttcgtctcg
cagggcgcacccgacgataagcggctctttgtgctcgccgcgacgccgacgaggtactac
gagtttgtgggccccgccagcctggaggcgcgcccctctccgccgcccctcgcgagcaga
cttccccttccggccagacctctgctgagggcgtgcacgggccacgtcgaggttgagggc
cctccgcccggcacggcgtggccgcccccgcacaagggcagctcgctcgactttgaccgg
cggagagggcaggaggggggcgggcgggggagcggcgcctcgccgccctcggcctttgcg
tggctctccgcgagaggcgtgtactgcggctccctcctcttcggcgcgcaggcccctcgc
gattcctgtgtctacgactcggagctgcacctgctcgtgttgtacggcggcggcgtggcg
gcgctctcccgcctctcgggcgagctgatgtgcgtcgctcggccgcccgccgcctgcggc
ccgctgctcggcctcgtgcgggagccggcgcagggcgggctgtgggcgtggggcgagggc
ggcacgctccgcgtctcggtcaaccgcgaggagcgccacatgtggaggctgcacctcgag
gcgcgcgacttcgagacggcgctcgcctgctgctcgcctggcgcgccgtcgcagcgcgac
ttggtgctcgcgcagcacgcggagcacgagctctcgcgcggcgcctacacgctcgccgcg
cgacagtttgcaaagaccggccgatccgtcgaggaggttgcgctccgcttcctctccctc
ggccagaagggcgcgccctccccccctccccccctcctctccgccgtcgccgcgccaccg
ccggcccccctccccctctctcgggggcaccgccgcctatcacggccgaccacatacgcg
ctgctcgaggctgcaggcagacacgccgagctcgcgcactacgcgcagctctgcggcgac
cacgagaggctgctgctgctgcacctcgagcggcggcagcccgccgccgccatcgcgcag
ctccgctcgctcctcgaggcggccggcgggggcggcgggcgggccttccccgaggctgcc
gctgcgggcaccggcggggcgggcgggagcggcggccgccccagggccgcgcccgcgccg
gggcggggccggctcgccgaccggcgggccgagctgcagcggctggtcgagcagtttgcc
gcggagctgctctcgcaggcgccggcagagacggtggggctgtggctgtgcgcgcccttc
ctcgacccgctccccctcctccccgcgctgatgcgctacgacgagcggcgcgccgccgcc
ggcgcggcggcaggctccgctgccggctcgccgccgcaccacggcatccgctacctgacg
cgcgcgacggcggccggctgccgcgagcgagacgtgcacaactacctgctgctgctgcac
gcgcgccgctcggccgacccgccactcctcgctttcctcgagggaagcgcgccgcccgcc
ggcgaggcaggcggcgaggtggcggcggaggccgtcggcgtcggcgcgctggccacctct
ggcggcgcgacgcactacgagcccgactacgcgctgcgggtgtgccagcggcacgggcgg
cgcgcggcgtgtgtgcggctctaccagctgcgcggcgactgcgccgaggcggtctcgctc
gcgctcgacagcggcgaggtgtgtctcgccaagcagagcgccaacctgctcccggccggc
agcccgctccggcggcggctctggctgcagattgcgcggcgcgtgctgtgcggccgtcgg
tccgactcgcagtacgcgcagctggaggaggcgatggagggggcggccgccttcgccgcg
ccgccgggcgacgaggcgctgcgcgtgcgcgtgcgcgaggcggtctcgctgctagaggag
tgcccgcagctgtcgatcgacttgctgctgccgctcttccccgactttacgcagatggag
cacctcagggagatcgcggaggagctgcggcaggaggcggagcagctgcggtcgcgccgc
ctcgaggcgcccgcgtcgcagccgtgcgacagcaccgagctcccgtcccacgtgcgggcc
cgcacctgcggcggcggcgccctcggcggccaccgctgcgtcgtcttcccctgcgggcac
gccttccggctgcgctgcctcgagcgggcgcgcgcggccggccacgagcgcgtgcggctc
gggagggcggacgcggaggccctcgtcgccgagtgcccgctgtgcggctccgccatggtg
gcgagcgccaccaagccgctcgtcgaccccgtcgccgacgctgagctgctggcgagctgg
gcggtctga
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