Emiliania huxleyi: EMIHUDRAFT_111742
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Entry
EMIHUDRAFT_111742 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ehx
Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ehx03009
]
EMIHUDRAFT_111742
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EMIHUDRAFT_111742
Ribosome biogenesis [BR:
ehx03009
]
Eukaryotic type
Pre-60S particles
Helicases
EMIHUDRAFT_111742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DUF2920
Motif
Other DBs
NCBI-GeneID:
17278879
NCBI-ProteinID:
XP_005786037
JGI:
Emihu1_111742
UniProt:
A0A0D3KCX3
R1DDR2
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MPPAPPPGALAAGGVTVDVLGQSGKLTLSNGDNSITVTMDSIYELDASGTQIGKSGPNNC
KHSREQFASTDFDVYAPTRTYAYGVPAWQTVFNVTLFDENQCDLTCPSSSPNPQRRRLES
RPCGDAGVLQVDVLVFEHDGIITPTDNESWAVVGGTVKFSVSVLNWPFCSGENDQSTDMG
KACMGKTGAGLELEIEIKGSSEVNGTLPAGEKRYTLATNAQRGNDITLELSDEVFVDGEE
WRAMEQGYALLKLNRIPGRSLIFVNAAHADAVAAGGAVADGEAAAAEGGGEAGGGGKKRK
RKGGGGAAAAPPTASDAEFGVSRGVDFRDVTAVINMDLPRGLPTYQHRVGRTARAGQGGT
AISMVDDADAADAALLQALRGEYGDALRQFSVDFRKLSAFRYRVDDAMRAVTRAAVREAR
LKEIKQELLHSKRLSEHFASNPDDLDALRHDKPLATVRRQPHLENVPAYLKPDTEGATAA
VAPVASRRRPRDGRKARRPASAFGGGGSKRRKDPLQTFKGGGGRAGKGRRK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgccccgccgcccggcgcactcgctgcgggcggcgtgactgtcgacgtgctc
ggtcagtcgggcaagctcacactctccaacggcgacaatagcatcaccgtgacgatggac
agcatctacgagctcgatgcatctggcacgcagatcgggaaatctggaccaaacaactgc
aagcactcgcgcgagcagtttgccagcaccgactttgacgtgtatgcgcccacccgcacc
tacgcctacggcgtgcctgcctggcagactgtcttcaacgtgaccttgtttgacgagaac
cagtgcgacctcacgtgcccaagcagcagccccaacccccagcggcgccggctcgagtcc
cgcccttgcggcgacgccggcgtgctccaggttgatgtgctcgtgtttgagcacgacggc
atcatcacaccaactgacaacgagtcgtgggcagtggttggcggcacggtcaagttttcc
gtctccgtgctcaactggcccttttgcagcggcgagaacgaccaatcgacggacatggga
aaggcttgcatgggcaagaccggcgctgggctcgagctcgagatcgaaatcaaaggctcg
agcgaggtcaatggcaccctgcccgcgggcgagaagcgctacacgctcgccaccaacgcc
cagcgcggcaacgacatcacccttgaactctcggacgaggtgtttgtcgatggggaagag
tggcgggcaatggagcaagggtacgcgctgctcaagctcaaccgcatcccaggccgctcg
ctcatcttcgtcaacgcggcgcatgcggacgccgtggcggccggcggcgctgtggcggac
ggggaggcggcggcggcggagggggggggcgaggcgggcggcggtggaaagaagcggaag
cgcaagggcgggggcggcgccgcggcggcgccgccgacggcctccgacgccgagttcggc
gtctcgcgcggcgtcgactttcgggacgtgacggccgtcatcaacatggacttgccccgc
gggctcccgacctaccagcaccgcgtcggccgcacggcgcgtgcggggcagggcggcacc
gccatctccatggtggacgacgctgacgccgccgacgccgcgctgctgcaggccctgcgc
ggggagtatggcgacgccctccgccagttctcggtcgactttcgcaagctgtcggcgttt
cggtaccgcgtggacgacgcgatgcgcgcggtgacgcgcgcggcggtgcgcgaggcgcgg
ctcaaggagatcaagcaggagctgctgcactcgaagaggctctcggagcactttgcctcg
aacccggacgacctcgacgcgctgaggcacgacaagccgctcgccaccgtccgccgccag
ccccacctcgagaacgtgcccgcctacctcaagccagacaccgagggcgccaccgccgcc
gtcgcccccgtggccagccgccgccggccgcgcgacggccgcaaggcgcggcgccccgcg
tccgcctttgggggtgggggcagcaagcggcgcaaggacccgctgcaaaccttcaagggc
ggcggcggccgggcgggcaaggggcggcgcaagtga
DBGET
integrated database retrieval system
