Emiliania huxleyi: EMIHUDRAFT_122935
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Entry
EMIHUDRAFT_122935 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03022
Basal transcription factors
ehx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EMIHUDRAFT_122935
09124 Replication and repair
03420 Nucleotide excision repair
EMIHUDRAFT_122935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_122935
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_122935
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EMIHUDRAFT_122935
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EMIHUDRAFT_122935
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EMIHUDRAFT_122935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
Helicase_C
Motif
Other DBs
NCBI-GeneID:
17278194
NCBI-ProteinID:
XP_005785349
JGI:
Emihu1_122935
UniProt:
A0A0D3KAY5
R1F210
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MKVKITGLDGGDAQAAAEYDDGGEYDGIPQEFVAPPPKERRTQRTLAAGLMESTADGADD
TSGCRDFRRELELKQHAASRPLWVCPDGRIVLEASSPVYAQALDLLVAISEPVSRTRHMQ
EYQLTQYSLYAGASMGLRTQDITAGLERFSKCGLPEEVRAMVAECTERYGKVKLILRNDR
YYIECPGDGAAFDALLHDAQIAEMRDDKIGDLNFLIGPKLYEANWLDLQAKGFIATVSCA
EVWCPMTAEFFAEYLRQPVAVGRQLYAMNPSKFRACEYLVRFHEARGDKVIVFSDNVFAL
KKYAIKLKRPYIYGPTPQHERMMLLEKFKSTSEWNTLFISKVGDTSIDLPEANVIIQVAS
HFGARRQEAQRLGRILRPKARRASEMFYSTKRQQFLVDQGYAFKVITNLVPDGQDELLYS
TQRDQLDLLREVLTDATSAEAQAEDAREAAEVEKDSGGAAVYGGGGVSRKRASMSELSGG
DGLTYAETSRRSAPAGPSQRHGVFKQIDKARQQQRGGRQAKAMGCGTSKPGLFYEEKLKQ
WRKRGGGDLEPVLASGAVALLDAQWIIRHAEAGGVLTHRQALPEEAFLSFADLVEATTGA
GGLPVAALSYPWLTKDHPDPRGANLSRVARALKALLTNNDGRITRLGVFWDFGSLHQHPD
PPNGVLRTEEQNALFKQGLSCLGTLYSHQHLFVLRLTSFPDGHKAEDQPEGTNVAKYVDR
GWCFTEQCWAGLTKPCALSLDLSKMSDGV
NT seq
2249 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaagatcaccgggttggatggcggcgacgcgcaggcggctgcggagtacgat
gatggcggcgagtatgacggcataccgcaggagtttgtcgctccgcctccgaaggagcgg
cgcacgcagcggacgctggccgccgggctgatggagtcgaccgcggacggcgcggacgac
acgagcggctgcagagactttcggcgcgagctggagctcaagcagcacgcggcgtcgcgg
cctctctgggtgtgtcccgacggccggattgtgctcgaggcgtcgtcgcccgtctatgcg
caggcgctcgacctgctcgtcgccatctcggagcccgtctctcggacgcggcacatgcag
gagtaccagctgacgcagtactcgctgtacgcgggtgcctcgatggggctccgcacacag
gacatcaccgccggcctcgagcgcttctcaaagtgcggcttgcccgaggaggtccgcgcg
atggtcgccgagtgcacagagcgctacggcaaggtgaagctcatcctgcgcaacgaccgg
tactacatcgagtgccctggcgacggcgccgccttcgatgcgctgctgcacgacgcgcag
atcgccgagatgcgcgacgacaagatcggcgacctcaactttctgatcggcccgaagctg
tacgaggccaactggctggacctgcaggcgaagggcttcatcgccaccgtctcgtgcgcc
gaggtctggtgccccatgaccgcagagttctttgctgagtacctccgccagccggtcgcc
gtcgggaggcagctctacgcgatgaacccgagcaagttccgtgcgtgcgagtacctcgtc
cgcttccacgaggcgcgcggcgacaaggtgattgtcttctcggacaacgtcttcgccctc
aagaagtacgccatcaagctcaagcggccgtacatttacggcccgaccccgcagcacgag
cggatgatgctgctcgagaagttcaagtcgacgagcgagtggaacacgctcttcatctcc
aaggtgggcgacacctccatcgacctgcccgaggccaacgtcatcatccaagtcgcctcc
cactttggagcgcggcggcaagaggcgcagcggcttggccggatcctgcgtccaaaggcg
cggcgcgcgtcggagatgttctactcgaccaagcggcagcagttcctcgtcgaccagggc
tacgccttcaaggtgatcaccaacctggtccccgacgggcaggacgagctgctctactcg
acgcagcgcgaccagctcgacctgctccgcgaggtgcttaccgacgcaacttcggccgag
gcgcaagccgaggacgcccgcgaggcggccgaggtggaaaaggactctggcggcgcggcg
gtgtacggaggaggcggcgtgtcgcggaagcgcgcgtcgatgagcgagctctcgggcggc
gacggcctcacttatgcggagacgagccgcaggagcgcgccggcggggccgagccagcgg
cacggcgtcttcaagcagatcgacaaggcgcggcagcagcagcgcggcgggaggcaggcg
aaagcgatgggctgcggcacgagcaagccgggcctgttttacgaggagaagctgaagcag
tggcgcaagcgcggcggcggcgacctggaaccggtcctcgcgagcggcgccgtcgccctc
ctcgacgcgcagtggatcatccgccacgccgaggcgggcggcgtcctcacccaccgccag
gcgctgcccgaagaggccttcctctctttcgccgacctcgtcgaggcgaccacgggtgct
ggtgggcttcccgtcgccgcgctctcctacccgtggctgaccaaggaccaccccgacccg
cgcggagccaacctctcccgcgtcgcgagggcgctcaaggccctgctcactaacaatgac
ggcagaatcacgcggctcggcgtgttttgggacttcggctcgctgcaccagcaccccgac
ccccccaacggcgtcctgcgcaccgaggagcagaacgcgctcttcaagcaggggctgagc
tgcctcggcacgctctactcccaccagcacttgttcgtgctgcggctgacctccttcccg
gacggccacaaggcggaggaccagcccgagggcaccaacgtggccaagtacgttgaccgc
ggctggtgcttcaccgagcagtgctgggctggcttgacaaagccttgcgccctctcgctc
gacctcagcaagatgagcgacggcgtgga
DBGET
integrated database retrieval system