Emiliania huxleyi: EMIHUDRAFT_194121
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Entry
EMIHUDRAFT_194121 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03440
Homologous recombination
ehx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EMIHUDRAFT_194121
03460 Fanconi anemia pathway
EMIHUDRAFT_194121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehx03032
]
EMIHUDRAFT_194121
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_194121
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EMIHUDRAFT_194121
DNA replication proteins [BR:
ehx03032
]
Eukaryotic type
DNA Topoisomerases
EMIHUDRAFT_194121
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
EMIHUDRAFT_194121
FA (Fanconi anemia) pathway
EMIHUDRAFT_194121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Motif
Other DBs
NCBI-GeneID:
17286959
NCBI-ProteinID:
XP_005794118
JGI:
Emihu1_194121
UniProt:
A0A0D3L104
R1G787
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MKVLAVAEKPSSYRTQQGPSQYNRLFEFSTPYRGSQCQMIVTSVTGHLMELEFCDERHAK
WKRCDLIELFDAPIRQRAIGFEVVDVCKRANPRLQALANLVPPDQRLADAVSARSEIDLR
LGAAFTRFQTLTLQERSTASNRTPPRAPPFTPHHVRGQDQYEGLDGLLSYGPCQFPTMWF
VARIDAFVREAFYAIEVMLYEICVERRLATVTKVDGHEKRKWRPTPLHTGFLSYPRTETD
KFKARGTTDGFDLAALINEQAGHPEWGGFARELQAGGFQALTPSLYPFLPPAQAHPPIHP
LKSGAPLQGDEARVYELVTRRFLACCACDALGFETTVDIEMAGEQFSSRGLMVWKWERWS
ARKIPSYYLGEQFEPTALHLHEGHTSPPSPLSEARAPSKAERSFGRLAELIGMMDEQGIG
TDATIAQHIKKTLDRGYVEKRVPNNTFHPLPLSRILLDSYTRMPQAFDLGVPHLRAEMER
DMAPAASAELARRGRDACGGKVCSGQMTRQECVDKTARKSEALHQPWVDMMRGLYRHASV
NSRCLHAAAAAILARPDASSWAPQRLSDGSRPSCGKCQGLMDLRHYDVPGGDLASHGHRC
PLDQFQVLSVTNTATGKTHQICPKCFKDPPAEATGGKAVDGLRCFACLADCPLASGSKVL
RPCPSCQRGELLFKAPKAMNGTLLECSNSGEGCDMKLYLPGGTTLQRLSAQPCAGCSHSL
LSFTFNRASLEPRLRMHPYDACCFCSEPNLAEILRDCNDTADGRRRVALLCSRCCGHGRC
GGDVSVDAWRR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcctcgctgtcgcggagaagccctcaagctaccgcacccagcagggcccgtcg
cagtacaacaggcttttcgagttcagcacgccctatcgcggctcgcagtgccagatgatt
gtcacgtcggtgacgggccacctgatggagctcgagttttgcgacgagaggcacgcaaag
tggaagcggtgcgaccttatcgagctcttcgacgcaccgatccgccagcgcgcgatcggg
ttcgaggtggtcgacgtgtgcaagagggcaaacccgcgcctgcaggcgctcgccaacctg
gtccctcccgaccagcgcctcgcggacgcggtgagcgcgcggtcggagatcgacctgcgg
ctcggcgcagccttcacgcgcttccagacgctcacgctgcaggagcgcagcacggcgagc
aaccggactcctcctcgcgcccctcccttcacgccgcaccacgtgcgtggtcaggaccag
tacgaggggctcgacggcttgctcagctacggtccgtgccagttcccgacgatgtggttc
gtggcgcgcatcgacgcttttgtgcgcgaggccttctacgcgatcgaggtgatgctctac
gagatctgcgtcgagcggcgcctcgcgacagtgacaaaggtggacggccacgagaagagg
aagtggcggccgacgccgctgcacaccggcttcctctcctacccgcggacggagacggac
aagttcaaggcgcgcggcaccaccgatgggttcgacctcgcggccctcatcaacgagcag
gcgggccaccccgagtggggaggcttcgcgcgcgagctgcaggcgggaggcttccaagcg
ctgacgccgagcctctaccccttcctgccgccggcacaggcgcacccgccgatccatccg
ctcaagtctggcgcgccgctgcaaggcgacgaggcgcgggtgtacgagctggtgacgcgc
cgcttcctcgcctgctgcgcgtgcgacgcgctcggcttcgagacgaccgtcgacatcgag
atggccggcgagcagttcagctcgcgcggcctgatggtgtggaagtgggagcggtggagc
gcgaggaagatcccgagctactacctcggggagcagtttgagccgacagcgctccacctc
cacgaggggcacacctccccgccctcgccgctctccgaggcgcgcgctccgtccaaggcg
gagcgaagctttggccgcctcgcggagctcattggcatgatggacgagcagggcatcggc
acggacgcgacgatcgcgcagcacatcaagaagacgctcgaccgcggctacgtcgagaag
cgcgtgccaaacaacaccttccacccgctgccgctctcgaggatcctgctcgacagctac
acgcggatgccgcaagccttcgacctcggcgtcccccacctgagggccgagatggagcgc
gacatggcgcccgccgcctcggcggagctcgcgcggcgcggccgcgacgcgtgcggcgga
aaggtctgctccgggcagatgacgaggcaggagtgcgtcgacaagacggcgcgcaagagc
gaggcgctgcaccagccctgggtcgacatgatgagagggctctaccggcacgccagcgtc
aacagccgctgcctccacgccgccgccgctgccatcctggcgcggcctgacgcctcgagc
tgggcgccgcagcggctgtcggacggctcgcgcccttcatgtggcaagtgccaaggcctg
atggacctgcgacactatgatgtgcctggcggcgacctcgcctcgcatggccaccgctgc
ccgctcgaccagttccaggtcctgagcgtgaccaacaccgcgacgggcaagacgcaccag
atctgcccaaagtgcttcaaggacccgcccgcagaggcgacgggcggcaaggccgtggac
ggcctccgctgcttcgcctgcctcgccgactgcccgctcgcctcaggctcgaaggtgctc
cggccttgcccgagctgccagcgcggcgagctgctcttcaaggccccgaaggccatgaac
gggacgttgctcgagtgctccaactccggcgagggctgcgacatgaagctctacctgccc
ggcgggaccaccctccagcgcctctctgcccagccgtgcgccggctgcagccactcgctc
ctctccttcaccttcaatcgcgcgtcactcgagccgcggcttcgcatgcacccgtacgac
gcatgctgcttttgctccgagccaaacctggcagagatcctgcgagactgcaacgacacg
gcggacgggcggcgcagggtggcactgctctgctcccgatgctgcggacacggccgctgc
ggtggggatgtttcagtcgatgcttggcgtcgataa
DBGET
integrated database retrieval system
