Emiliania huxleyi: EMIHUDRAFT_199049
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Entry
EMIHUDRAFT_199049 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_199049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_199049
03009 Ribosome biogenesis [BR:
ehx03009
]
EMIHUDRAFT_199049
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EMIHUDRAFT_199049
Spliceosome [BR:
ehx03041
]
Complex A
U1 snRNP components
U1 related factors
EMIHUDRAFT_199049
Complex B
EMIHUDRAFT_199049
Ribosome biogenesis [BR:
ehx03009
]
Eukaryotic type
Pre-60S particles
Helicases
EMIHUDRAFT_199049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCCH
P-loop_SecA
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
17251583
NCBI-ProteinID:
XP_005757796
JGI:
Emihu1_199049
UniProt:
A0A0D3I282
R1B832
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MTTTRTSDTQTQAGSRSREFSRPANTNYKDVQDQGVDQPASTEVAQFWKENDLKVYGGSP
PPFLSFEEAQLPRPIMDAIAKAGFTKPSVIQSQSWPAAMAKRDLIGVAKTGSGKTLGFLV
PGFMYIQQQRVNPMQGPSLLTLAPTRELAMQIEVECQKFGLPLGIRSVCCYGGAPKGQQL
MAMRQGCHVVIGTPGRINDFLESGQIQLHQVAYLVFDEADRMLDMGFEPQIRKIVRQVPP
QRQTLFYTATWPKQVRALAYEFMRSPVQVEVGDINSLNANKDITQYVHVTRGPGEKQQML
MRIFQSLEAGTRTLVFTSTKRMADQLGMQLGRQIGSGVIHGDKDQREREAVLADFKSGRR
PVMIATDVAARGIDVKECKAVINYDFPGNIEDYVHRIGRTGRAGAKGEAHTFMDGQKDGK
YARALCEIMVKADQAIPGPIAQMAGLRSGTYRPYDERSALQPHPSGGMMTAQAAQMAATI
PQAVNKPDECGDFKRGNCQRGARCNARFGSDRGDRGRDRDDDRGRRRSPDYDDYRRRSRS
RDRRRRSRSRD
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacacgcacgagcgacacacagacacaagcagggagtcgaagcagggagttc
tcgcgccccgccaacacaaactacaaggacgtgcaggaccaaggcgtcgaccagccggcg
tcgaccgaggtggcgcagttctggaaggagaacgacctcaaggtgtacggcggctcgccg
ccgccgttcctctccttcgaggaggcgcagctgccgcggccgatcatggacgccatcgcc
aaggccggcttcaccaagccctccgtcatccagtcccagtcgtggcccgcggcgatggcc
aagcgcgacttgattggcgtcgccaagaccggctcgggcaagacgctcggcttcctcgtg
ccgggtttcatgtacatccagcagcagcgcgtcaacccgatgcagggaccgtccctgctc
acgctggcgccgacgcgcgagctcgccatgcagatcgaggtcgagtgccaaaagtttggg
ctgccgctcgggatccggtccgtctgctgctacggcggcgcgcccaaggggcagcagctg
atggcgatgcggcaggggtgccacgtggtaatcggcacgccggggcggatcaacgacttc
ctcgagtcgggccagatccagctgcaccaggtcgcctacctggtgtttgacgaggcggac
cggatgctcgacatgggctttgagccgcagatccgcaagattgtgcgccaagtgccgccg
cagcggcagacgctcttctacacggccacgtggccaaagcaggtgcgcgcgctggcctac
gagttcatgcggtcgcctgtgcaggtcgaggtgggcgacatcaactcgctcaacgcaaac
aaggacatcacgcagtacgtgcacgtgacgcgcgggccgggcgagaagcagcagatgctc
atgcgcatcttccagtcgctcgaggcgggcacgcgcacgctggtcttcacgtcgaccaag
cggatggcggaccagctgggcatgcagctcggccgccagatcggcagcggcgtcatccac
ggcgacaaggaccagcgcgagcgcgaggctgtcctcgccgacttcaagagcggccgccgg
ccagtgatgatcgcgaccgacgtggccgcgcgcggcatcgacgtcaaggagtgcaaggcc
gtcatcaactacgacttcccgggcaatattgaggactatgtccaccgcatcggccgcacc
ggccgcgccggcgccaagggggaggcgcacaccttcatggacgggcaaaaggacggcaag
tacgcgcgcgcgctgtgcgagatcatggtcaaggcggaccaggcgatcccggggccaatc
gcgcagatggcaggcctgcgcagcgggacgtaccgcccgtatgacgaacgctccgcgctg
cagccgcacccgagcggcggcatgatgaccgcccaggcggcgcagatggcggcgacgatc
ccgcaagctgtcaacaagcccgacgagtgcggcgacttcaagcgcggcaactgccagcgc
ggcgcgcgctgcaacgcccgctttggctcggaccgcggcgaccgcggccgcgaccgtgac
gacgaccgcggacgcaggcgttcgcccgactacgacgactatcgccgccgttcgcgctcg
cgcgaccgtcgccgccgctcgcgcagccgcgactga
DBGET
integrated database retrieval system
