Emiliania huxleyi: EMIHUDRAFT_203882
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Entry
EMIHUDRAFT_203882 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ehx
Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehx03016
]
EMIHUDRAFT_203882
Enzymes [BR:
ehx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EMIHUDRAFT_203882
Transfer RNA biogenesis [BR:
ehx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EMIHUDRAFT_203882
Prokaryotic type
EMIHUDRAFT_203882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
19046631
NCBI-ProteinID:
XP_005781711
JGI:
Emihu1_203882
UniProt:
A0A0D3K0J7
R1D2K8
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MRTVTSEASVGITETCTPGPGFRAATKQRYSDFIVNEVRLSGEPVHLASLPAAVAQKAAE
EEELPPPAEAVEELAELLGEGPAAAVLRLDTHERDAARARVEARAWKRQKGGGRGGGSEL
LRDGVLLSRDDDKVHRKAVHEWIKRHLPRLTSTTEEDADGGKCVRAGSHRYLEFTLYKEN
RDTLHAILQLAQSLHVSQNLFTFAGTKDRRAVTAQRVSAFRLPASKIEQLMARKPFGDSL
VASDCTNVQAALEGLRTHGFPNYFGLQRFGANVDAATHEVGAALLRADYPQALRQLDEGD
AVAALRLLPRRPSVARQLLEGLRDSGSSNVLAALSRLPKNLRSMYLHALQSWVWNHAASE
RLRRYGCEAAPHVVTAEEAAARTYSIEDVVLPLPGTKVVMPQNELAEVYTELLARQRLEP
ASFHHKVKEMVMPGAYRRLVQRPRDLSWQYFRYTDPRVPLARTDLARLRGDPEPQGVADG
PRLAVVLRFTLPPSTYATMLLRELTKQSTDLTHQLELNQPHVAPTSAEHAKEE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccgtgacaagcgaggcgtcggtgggtatcaccgagacgtgcacgccgggcccc
ggcttccgtgccgcaacgaagcagcgctactcggacttcatcgtcaacgaggtgcggctg
agtggcgagccggtccatctcgcatcgctcccagctgccgtcgcccagaaggcggccgag
gaggaggagctgccgccgccggccgaagcagtggaggagctcgccgagctgctgggcgag
ggccccgccgcggcggtgctgcggctggatacgcacgagcgcgatgcagcacgggcgcgc
gtcgaggcacgcgcttggaagcggcaaaagggaggcggtcgaggcggcggctcggagctg
ctgcgcgatggcgtgctgctgtctcgcgacgacgacaaggtgcaccgcaaggcggtgcac
gagtggatcaagcgacacctgccgcgcctcacgtcgaccaccgaggaagatgccgacggc
gggaagtgcgtccgagcaggcagccaccggtacctcgagttcactctgtacaaggagaac
cgcgacacgctgcacgccatcctccagctcgctcagtcgctgcacgtgtcgcagaacctc
ttcaccttcgccggcaccaaggaccgacgcgccgtcaccgcgcagcgcgtctccgccttt
cggctgcccgcgtcaaagatcgagcagctcatggcgcgaaagccgtttggtgactcgctc
gtcgccagcgactgcaccaacgtgcaggcggcattggagggcctgcggacacacggcttc
ccaaactactttgggctgcagcgcttcggcgccaacgtcgacgctgccacacatgaggtg
ggcgccgctctgctacgcgccgactacccccaggcgctgcggcagctcgacgagggagac
gccgtcgccgcgctgcgcctgctgccgcggcggccgagcgtagcgcggcagcttctcgaa
ggcttgcgggacagcggctcgtccaacgtgctcgcggcgctctctcggctgccgaagaat
ctgcgctcgatgtatttgcacgcgctgcagagctgggtgtggaaccacgccgcgtcggag
cgcttgcgccgctacggctgcgaggcggcgccgcacgtcgtgactgcggaggaggcggcc
gcacgcacctactccatcgaggatgtggtcttgccgctgccggggaccaaggtggtgatg
ccgcaaaatgagctcgccgaagtgtacaccgagctgctcgcccgccagcggctcgagccc
gcctccttccaccacaaggtcaaggagatggtgatgccgggcgcgtaccggcggctggtc
cagcggccgcgtgacctctcgtggcagtactttcgctacaccgacccgcgcgtgccgctc
gcgcgcaccgatttggcccggctgcgcggcgatcccgagccgcagggcgtcgccgacggg
ccgcgcctcgcagtggtgctgcgcttcacgctgccgccgtcgacgtacgcgacgatgctc
ctccgcgagctgaccaagcaatccaccgacctcacgcatcagctggagctcaaccagccg
cacgttgcgccaacgagcgccgaacatgcaaaggaggaatga
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