Emiliania huxleyi: EMIHUDRAFT_225179
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Entry
EMIHUDRAFT_225179 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EMIHUDRAFT_225179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_225179
03036 Chromosome and associated proteins [BR:
ehx03036
]
EMIHUDRAFT_225179
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
EMIHUDRAFT_225179
Chromosome and associated proteins [BR:
ehx03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
EMIHUDRAFT_225179
RSF complex
EMIHUDRAFT_225179
WICH complex
EMIHUDRAFT_225179
B-WICH complex
EMIHUDRAFT_225179
NORC complex
EMIHUDRAFT_225179
BRF complex
EMIHUDRAFT_225179
NuRF complex (fruit fly)
EMIHUDRAFT_225179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
PHD
Prok-RING_1
zf-PHD-like
PHD_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
17282893
NCBI-ProteinID:
XP_005790054
JGI:
Emihu1_225179
UniProt:
R1FF07
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MAARIHDWCAVCRGDAESHDDLIKCRGCKAKYHLNCAGLRAWPENLKEWRCTGCEGSHSR
SSSHQSRITAVRAVHRSLRSRAAGFFEKSRTAIAPFVTPDALAKLTAGGEAVLAAQSKPI
VLGPREPFIQATLRPYQVDGVNWLLRQYSLGTGGILGDEMGLGKTIQTLAFLSALKAAKL
PGPHLVITPLAVLQNWANELKRFTPQLSFVKVHGSASERERLLSSPAVLQAEYDVYLTTY
DTLRAEEAFFSEAFLFHTVTIDEGHRLKNEASSLCASLARLPIPFRLLLTGTPLQNNLHE
LWALLAYVIPNTLSSSAFDAAASVRRVKSEVETSLLPKVEFVLKPPLTPLQRSWYRQLLG
SSRLMQLQKVVNHPKAIALTLDRDRAAAAAKHAAAAGSSFIKLPPTDNSHLSAAARQDEA
ALRGLTGESLVASSGRTLRPWASDTVGHVPRRPRLRPVIGKLAMLDRLLRRCKAAGSRAL
IFSQYTLSLDVLEEYARYRWGDLGADRDCTPASEPWRVRSAYFRLDGTTNRIAREMDMRS
FNEDGSSAFLYLISTRAGGQGINLATADVVVLYDTCYNPQVDLQAQDRAHRIGQTKQVKI
YRLISPSSFEERVLRRARQKLLLDALVIKKEGEGGAGAVFDPTAEEAPPLTADEYDALLD
AAKPANVKDEASAAKVLAAESEAVASEWQPAAASRDHSELVTEIKQLMVARGVGQAQLYR
LLDIKKESFSAWLTWRERPSLPKATVAGIDAKVAVYLADPANAQAQAAAAVKARAELASA
KAAASATETVEAPREGRKRKAAAPDRFSPPAKLHQPGKARVALQHDDFCFACGDGGELLE
CTVCPRMYHLACVGLSAVPKGTWHCPWHSCWECDRKSSQVGGQLFHWKLKTDGKSSTGYL
GVSRREDCGRLKFVAQVSLHDGHRMRLTYLGVFPTAVMAAVAVAKAKLRGAAFPELGEGW
RLLSRRREVLVEGKATTRVIKCYIDPRGKRYSSLKQAKAAAGSSSAPSGRASSAEVAIDE
ADRMDDGASTATSDSAPSDTGPLFAADGACASEASRSRAIEPPVKRRATLVVGQKQRPPL
TLSEPQSAPWPPGEELEMLERLAQLENRRGCLL
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgaattcacgactggtgtgccgtgtgccgcggcgacgccgagtcgcacgac
gacctgatcaagtgccgaggctgcaaggccaagtaccaccttaactgcgcgggccttcgg
gcgtggcccgagaatctcaaggagtggcgttgcaccggctgcgagggctcgcacagtcgg
tcgtcctcgcaccaatcacgcatcaccgctgtgcgcgctgtccaccgttcgctccgctcg
cgtgctgcgggcttcttcgagaagtctcgcaccgcgatcgctccctttgtgacgccggac
gctctcgccaagctcacggcgggcggcgaggcggtgctcgccgcgcagtccaagccgatc
gtgctcggcccgcgcgagcccttcatccaggcgacgctccggccctaccaggtcgacggc
gtcaactggctgctgcgccagtactcgctcggcacgggcggcatcctcggcgacgagatg
gggctcggcaagacgatccagacgctcgccttcctctccgcgctcaaggcggcgaagctg
ccgggccctcacctcgtcatcacgccgctcgccgtgctgcagaactgggccaacgagctc
aagcgcttcacgccgcagctctcctttgtcaaggtgcacggctccgcgagcgagcgggag
cggctactgtcgtcgccggcggtgctgcaggccgagtacgacgtctacctgacgacgtac
gacacgctgcgcgccgaggaggccttcttctccgaggccttcctcttccacaccgtcacc
atcgacgagggccaccgcctcaagaacgaggcatcctcgctctgcgccagcctcgcgcgg
ctgcccatcccgttccgcctcctcctcaccggcacgcccctccaaaacaacctgcacgag
ctctgggcgctcctcgcatacgtcatcccaaacaccctctcctcctccgcgttcgacgcc
gccgcctccgtccggcgagtcaagtccgaggtcgagacgtcgctgctcccaaaggtcgag
ttcgtgctcaagccgccgctcacgccgctgcagcgctcgtggtaccgccagctactcggg
tcgtctcggctgatgcagctgcagaaggtcgtgaaccaccccaaggccatcgcgctcacc
ctcgaccgcgaccgcgccgccgccgccgccaagcacgccgccgctgcgggctcgtccttc
atcaagctcccgccgacagacaactcgcacctgtcggcggcggcgcggcaggacgaggcc
gcgctgcgagggctgactggagagagcctcgtggcctcgtccggcagaactctccgcccg
tgggcctccgacacggtggggcacgtcccaagacgcccgcggctccgtcccgtcataggc
aagctcgccatgctcgaccgactcctccgccggtgcaaggcggcgggcagccgcgcgctc
atcttctcgcagtacacgctgtcgctcgacgtcctcgaggagtacgcgcgctaccggtgg
ggcgaccttggcgcggaccgcgactgcacaccggcgtccgaaccgtggcgcgtccgctcg
gcctacttccggctcgacggcaccaccaaccgcatcgcgcgagagatggacatgcgctcc
ttcaacgaggacggctcgagcgcctttctgtacctcatctcgacgcgcgccggcgggcag
gggatcaacctcgccaccgccgacgtggtggttctgtacgacacgtgctacaacccgcag
gtggacctgcaggcgcaggaccgcgcgcaccgcatcggccagacgaagcaagtcaagatc
taccggctcatctccccgtcgagcttcgaggagcgcgtgctgcgccgcgcgcgccagaag
ctgctactcgacgcgctcgtcatcaagaaggagggcgagggcggcgccggcgccgtcttt
gaccccacggcggaggaggcgcctccgctcaccgccgacgagtacgacgcgctgctcgac
gccgccaagcccgccaacgtcaaggacgaggcgtcggcggcaaaggttttggcggcggag
tcagaggccgtggcgtccgagtggcagcctgcagcggcgtcccgcgaccactcggagctc
gtgaccgaaatcaagcagctgatggtcgcgcgcggggtgggccaggcgcagctctaccgc
ctgctcgacatcaagaaggagtccttctccgcgtggctgacgtggcgagagcggccgtct
ctccccaaggccaccgttgcgggcatcgacgcaaaggtcgcagtctacctcgccgatccg
gcaaacgcgcaggcgcaggcagccgcggccgtcaaggcgcgcgcagaactggcttccgcc
aaggctgcggcgtcggcgaccgagacggtggaggcgccccgcgaggggcggaagcgcaag
gcagccgcgcccgaccgcttctcgccacccgcgaagctgcaccagccaggcaaggcgcgc
gtcgcgctgcagcacgacgacttttgcttcgcttgcggcgacggcggcgagctcctcgag
tgcaccgtctgcccacgcatgtaccacctcgcgtgcgtgggcctgagcgcggtcccgaag
gggacgtggcactgcccgtggcactcgtgctgggagtgcgaccgcaagtcgtcgcaagtc
ggaggccagctgttccactggaagctcaagactgacggcaagagctccacgggctacctg
ggtgtctcccgccgcgaggactgcggcagactcaagtttgtcgcgcaggtgagcctgcac
gacgggcatcgcatgcggctgacgtacctcggcgtcttccccaccgcggtgatggcggcg
gtggcggtcgccaaggcgaagctgcgcggcgcggccttcccggagctgggcgaaggctgg
cggctgctctcgaggcggcgcgaggtgcttgtcgaaggcaaggcgaccacgcgcgtcatc
aagtgctacatcgacccgcgcggcaagcgctactcgtcgctcaagcaagccaaagcggca
gccggctcgtcctcggcaccctccggccgcgccagcagcgcggaggtcgccatcgacgag
gccgatcggatggacgacggcgcttcgacagccacgtccgacagcgccccgtccgatacg
ggccccctcttcgccgccgacggggcttgcgcctcggaggcgtcgcgctctcgcgccatc
gaaccgccggttaagcgccgagcgacgctcgtggtgggacagaagcagcgcccgccgctc
acgctctcggagccgcagtccgcgccttggccaccgggcgaggagctggagatgctcgag
cggctcgcacagctcgagaatcgcaggggttgcctgctttga
DBGET
integrated database retrieval system
