Emiliania huxleyi: EMIHUDRAFT_234784
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Entry
EMIHUDRAFT_234784 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
ehx
Emiliania huxleyi
Pathway
ehx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMIHUDRAFT_234784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_234784
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EMIHUDRAFT_234784
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
EMIHUDRAFT_234784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
17274187
NCBI-ProteinID:
XP_005781071
JGI:
Emihu1_234784
UniProt:
A0A0D3JYQ7
R1D0U5
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MSSTAELAYTLEGVAQGMREDGRARLDLRHLAIECSIFAHTCGSARVTLGNTEAIVGVVA
ELSEPESDAPDAGRISVSVGAAGNLALPDYGGTDAVTFLEAALAPLYSHKALGPALRPLC
ISRGAQCWELRVHAQLISCDGCPLDALALGVRAALQSTRSLDESLPFDASGVPLFLTVSN
LGPHLVADCSAAERRAAGSALSLGLNAAGEVCAVRGGGGCGVHLALAADMLQTARLLCAA
LLEAVADATAAALRDAQMRGHPYAESGAYGFLA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctaccgcggagctcgcctacacgctcgagggcgtcgcgcagggcatgcgggag
gacggtcgggcgcggctcgacctgcggcacctcgcgatcgagtgctcgatctttgcgcac
acgtgtggctcggcgcgcgtgacactcggaaacaccgaggcgattgtcggcgtcgtcgca
gagctgtcggagccggaatccgacgcgccggacgcggggaggatcagcgtgagcgtcggc
gccgcgggcaacttggcgctgcccgactacggcggcaccgacgccgtcaccttcctcgag
gcggcgctcgcgccgctctactcgcacaaggctctcggcccggcgctgcggccgctgtgc
attagccgcggcgcgcagtgctgggagctgcgcgtgcacgcgcagctgatctcgtgcgac
ggctgcccgctggacgcgctcgccctcggcgtgcgcgccgcgctgcagagcacgcggtcg
ctcgacgagtccctccccttcgacgcgagcggcgtgcccctcttcctcaccgtctccaac
ctcggacctcacctggtcgccgactgctcggccgcagagcggcgcgccgcgggcagcgcc
ctctcgctcgggctcaacgccgccggcgaggtgtgtgcggtgcgcggcggcgggggctgc
ggcgtccacctggcgctggcggcggacatgctgcaaaccgcccggctgctctgcgcggcg
ctgctcgaggcggtggccgacgcgacggcggccgccttgcgcgacgcccagatgcggggc
cacccatacgcggagtcgggcgcgtacggcttcctggcgtga
DBGET
integrated database retrieval system
