Emiliania huxleyi: EMIHUDRAFT_243837
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Entry
EMIHUDRAFT_243837 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ehx
Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehx03016
]
EMIHUDRAFT_243837
Enzymes [BR:
ehx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EMIHUDRAFT_243837
Transfer RNA biogenesis [BR:
ehx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EMIHUDRAFT_243837
Prokaryotic type
EMIHUDRAFT_243837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
17263837
NCBI-ProteinID:
XP_005770117
JGI:
Emihu1_243837
UniProt:
A0A0D3J2F3
R1C532
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MRTVTSEASVGITETCTPGPGFRAATKQRYSDFIVNEVRLSGEPVHLASLPAAVAQKAAE
EEELPPPAEAVEELAELLGEGPAAAVLRLDTHERDAARARVEARARKRQKGGGRGGGSAG
SHRYLEFTLYKENRDTLHAILQLAQSLHVSQNLFTFAGTKDRRAVTAQRVSAFRLPASKI
EQLMARKPFGDSLVASDCTNVQAALEGLRTHGFPNYFGLQRFGANVDAATHEVGAALLRA
DYPQALRQLDEGDAVAALRLLPRRPSVARQLLEGLRDSGSSNVLAALSRLPKNLRSMYLH
ALQSWVWNHAASERLRRYGCEAAPHVVTAEEAAARTYSIEDVVLPLPGTKVVMPQNELAE
VYTELLARQRLEPASFHHKVKEMVMPGAYRRLVQRPRDLSWQYFRYTDPRVPLARTDLAR
LRGDPEPQGVADGPRLAVVLRFTLPPSTYATMLLRELTKQSTDLTHQLELNQPHVAPTSA
EHAKEE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccgtgacaagcgaggcgtcggtgggtatcaccgagacgtgcacgccgggcccc
ggcttccgtgccgcgacgaagcagcgctactcggacttcatcgtcaacgaggtgcggctg
agtggcgagccggtccatctcgcatcgctcccagctgccgtcgcccagaaggcggccgag
gaggaggagctgccgccgccggccgaagcagtggaggagctcgccgagctgctgggcgag
ggccccgccgcggcggtgctgcggctggacacgcacgagcgcgatgcagcacgggcgcgc
gtcgaggcacgcgctcggaagcggcaaaagggaggcggtcgaggcggcggctcggcaggc
agccaccggtacctcgagttcactctgtacaaggagaaccgcgacacgctgcacgccatc
ctccagctcgctcagtcgctgcacgtgtcgcagaacctcttcaccttcgccggcaccaag
gaccgacgcgccgtcaccgcgcagcgcgtctccgcctttcggctgcccgcgtcaaagatc
gagcagctcatggcgcgaaagccgtttggtgactcgctcgtcgccagcgactgcaccaac
gtgcaggcggcattggagggcctgcggacacacggcttcccaaactactttgggctgcag
cgcttcggcgccaacgtcgacgctgccacacatgaggtgggcgccgctctgctacgcgcc
gactacccccaggcgctgcggcagctcgacgagggagacgccgtcgccgcgctgcgcttg
ctgccgcggcggccgagcgtagcgcggcagcttctcgaaggcttgcgggacagcggctcg
tccaacgtgctcgcggcgctctctcggctgccgaagaatctgcgctcgatgtatttgcac
gcgctgcagagctgggtgtggaaccacgccgcgtcggagcgcttgcgccgctacggctgc
gaggcggcgccgcacgtcgtgactgcggaggaggcggccgcacgcacctactccatcgag
gatgtggtcttgccgctgccggggaccaaggtggtgatgccgcaaaatgagctcgccgaa
gtgtacaccgagctgctcgcccgccagcggctcgagcccgcctccttccaccacaaggtc
aaggagatggtgatgccgggcgcgtaccggcggctggtccagcggccgcgtgacctctcg
tggcagtactttcgctacaccgacccgcgcgtgccgctcgcgcgcaccgatttggcccgg
ctgcgcggcgatcccgagccgcagggcgtcgccgacgggccgcgcctcgcagtggtgctg
cgcttcacgctgccgccgtcgacgtacgcgacgatgctcctccgcgagctgaccaagcag
tccaccgacctcacgcatcagctggagctcaaccagccgcacgttgcgccaacgagcgcc
gaacatgcaaaggaggaatga
DBGET
integrated database retrieval system
