Emiliania huxleyi: EMIHUDRAFT_372652
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Entry
EMIHUDRAFT_372652 CDS
T02915
Symbol
VTI1-4
Name
(RefSeq) vesicle transport through interaction with t-snares
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ehx
Emiliania huxleyi
Pathway
ehx04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
EMIHUDRAFT_372652 (VTI1-4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ehx04131
]
EMIHUDRAFT_372652 (VTI1-4)
Membrane trafficking [BR:
ehx04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
EMIHUDRAFT_372652 (VTI1-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Fusion_gly
OppC_N
Orf78
DUF4407
Motif
Other DBs
NCBI-GeneID:
17250142
NCBI-ProteinID:
XP_005756425
JGI:
Emihu1_372652
UniProt:
A0A0D3HYB1
R1CZN5
LinkDB
All DBs
Position
Unknown
AA seq
232 aa
AA seq
DB search
MSEFASYESEFTHACMDANSKISTLERLAPGSGRDAAVKEAQAAVDSAADVVSRLEMEAG
PSDRGRVRECKSSLSELRSKLSVARSNNRAAELAREQLLASADAPARMEAEAQHARLLET
TSRMQRGTDKLRAACQVAVETEAVGVSILGDLDQQRMTLEQTRERLRTANRGLERSKKLL
QSMTKRAAANKMLMIGIIAFLCLMIVAILYLKFFMPSGSDPSPPPSPPPPQR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtttgcgtcgtacgagagcgagttcacgcatgcctgcatggacgcgaatagc
aagattagcacgctcgaacgcctcgcgccgggcagcgggcgcgacgcggcggtgaaggag
gcgcaggcggccgtcgactcagctgccgatgtggtgtcgcggctcgagatggaggcgggg
ccttcggaccgtgggcgcgtccgcgagtgcaagtcgagcctctccgagctacgctccaag
ctctccgtcgctcgctccaacaaccgcgccgcagaactcgcgcgcgagcagctcctggcg
agtgccgacgcgcccgcgcgtatggaggctgaggcgcagcacgcgcggctgctggagacg
acgagccggatgcagcgcgggacggacaagctgcgggccgcgtgccaggtcgcggtggag
accgaggcggtcggcgtctccatcctgggagacctggatcagcagcggatgacgctcgag
caaacgagagagaggctgcggacggccaaccgcgggctcgagcgctcgaagaagctgctg
cagtcgatgaccaagcgagcggcggccaacaagatgctgatgatcggcatcatcgccttc
ctctgcctgatgatcgtggcgatcctctacctcaagttcttcatgccctcgggctccgac
ccctctccgccgccttcaccacccccgccgcagagatga
DBGET
integrated database retrieval system
