Emiliania huxleyi: EMIHUDRAFT_40952
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Entry
EMIHUDRAFT_40952 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ehx
Emiliania huxleyi
Pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_40952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_40952
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_40952
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
EMIHUDRAFT_40952
Spliceosome [BR:
ehx03041
]
Complex B
Other components
Prp19-related factors
EMIHUDRAFT_40952
Complex C
EMIHUDRAFT_40952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
LemA
Motif
Other DBs
NCBI-GeneID:
17268432
NCBI-ProteinID:
XP_005775314
JGI:
Emihu1_40952
UniProt:
A0A0D3JHA0
R1E822
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
LDESDLLFEEDILRNAYSLKYWWRYMEAKKRSPARQRNLIAERALKYLPGCYKIWHAYLA
DRRAQCKAKEPGHPAHARLNAVYERALVYMHKMPRIWLDYLEILAAQHAHTTTRRAFDRA
LRALPVTQHERIWKLYLPYAKASPVPEAAVRIYKRRAGSRRERERESERVPARAHRLESR
ERAARVCRRQQAQAGRGSRATRRLVAAASSSPRPHSLPLPSQVLNREGFVSLRGKSRHKL
VQPPPTPLPQVRDFSMVFDAYSQFEESLITALIERQAQQQAAADLAAAESGGASAEASKA
AAATTLELDMRLERLERLMERRPELLSSVLLRQNPHSVHEWLKRASLFEASPAKAIQTYA
AAVDPRRAVGRPSSLWLGFAKFYESHGDIKNARAILRKARPSRDPAETQPRPSRSVDELA
SIWMGWSEMELRHKKYPEALAVLAEATAVPPASRRAKEKEGPVQDRLYKFTKLWAFYADL
QESLAGFEPTRVTYDKMIELRIVTPQLVLNYAAFLEEHKHFELAFQAHRPKGVALFKYPH
ALPLWLSYLTKFTARFGGAKLERGRDLFEQARFGRDAAEREPETSPRYSRDAAHGLARNA
MAVYDRAAGAVALEKRASVYQLYIAKAAEYFGVTKTRDIYEAAAAARAAIGALPSSEAPS
FCLRYANLERKLGEIDRARAIYMHGAQEVDPAVAAGSADGDVRPSAQAWHDFEVSHGNED
TFREMLRLKRTVRASF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
ctcgacgagagcgacctgctcttcgaggaggacatcctgcgcaacgcctactcgctcaag
tattggtggcggtacatggaggccaagaagcgctcgccggcgcggcagcgcaacctcatc
gccgagcgggcactcaagtacctgccgggctgctacaagatctggcacgcgtacctggcg
gaccggcgggcgcagtgcaaggccaaggagcccggacaccccgcgcacgcgcgcctcaac
gccgtgtacgagcgggcgctcgtctacatgcacaagatgccgcgcatctggctcgactac
ctcgagatcctggccgcgcagcacgcgcacacgacgacgcggcgcgccttcgaccgcgcg
ctgcgcgcgctgccggtcacgcagcacgagcgcatctggaagctctacctgccgtacgca
aaggcgagccccgtgccggaggccgccgtccgcatctacaagaggcgcgcggggagccgc
cgagagagagagagagagagcgagagagttccggcgcgcgcgcaccggctagagagccga
gagagagccgcgagagtgtgtcggaggcagcaggctcaagctggcagaggcagtcgagcc
acgaggcgactcgtcgcagctgcctcctcctccccccggcctcactccttgcctctcccc
tcgcaggtcctcaaccgggaggggttcgtctcgctgcgaggaaagtcgcgccacaagctg
gtgcaacccccccccacccccctcccccaggtgcgcgacttttcgatggtcttcgacgcc
tactcccagttcgaagagtccctcatcaccgccctcatcgagcggcaagcgcagcagcaa
gccgcagcagacctcgccgccgccgagtcgggcggcgcctcggccgaggcctcgaaggcg
gcggcggcgacgacgctcgagctcgacatgcggctcgagcggctcgagcggctgatggag
cggcggcccgagctgctctcgtcggtgctgctgcggcagaacccgcactccgtgcacgag
tggctcaagcgcgcctccctcttcgaggcctcgcccgcaaaggcgatccagacctacgcc
gccgcagtcgacccgcgccgcgccgtcggtcggccctcctccctctggctcgggttcgca
aagttctacgagtcgcacggcgacatcaagaatgcgcgcgccatcctccgcaaggcgagg
cccagccgagacccagccgagacccagccgagacccagccgaagcgtcgacgagctcgcc
tcgatctggatggggtggagcgagatggagctgcgccacaaaaagtacccggaagcgctc
gccgtgctcgccgaggcgacggcggtgccgcccgcgtcgcgccgcgcaaaggagaaggag
gggccggtgcaggaccggctgtataagttcaccaagctctgggccttctacgccgacctg
caagagtcactcgccgggttcgagccgacgcgcgtgacgtacgacaagatgatcgagctg
cggatcgtgacgccgcagctggtcctcaactacgccgccttcctcgaggagcacaagcac
ttcgagctcgccttccaggcgcacaggccgaagggcgtcgccctcttcaagtacccgcac
gcgctccccctctggctgagctacctcactaagttcaccgcgcgcttcggcggcgcaaag
ctcgagcgcggccgcgacctcttcgagcaggcgagattcggccgagatgcggccgagagg
gagccagagacatcgccgagatacagtcgagatgcggcgcacggcctcgcgcgcaacgcg
atggccgtctacgaccgcgccgccggcgccgtcgcgctcgagaagcgagcgagcgtctac
cagctctacatcgcaaaggcggcggaatactttggcgtcactaagacgcgcgacatctac
gaggccgccgccgccgcgcgagctgccatcggcgcgctgcccagcagcgaggctccctcc
ttctgccttcgctacgccaacctcgagcgcaagctcggcgagatcgaccgcgcgcgcgcc
atctacatgcacggcgcgcaggaggtggacccggccgtggcggcgggctccgcggacggc
gacgtgcggccctccgcgcaggcgtggcacgatttcgaggtgtcgcacggcaacgaggac
accttccgcgagatgctgcgcctcaagcggacggtgcgcgcctccttc
DBGET
integrated database retrieval system
