Emiliania huxleyi: EMIHUDRAFT_41159
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Entry
EMIHUDRAFT_41159 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ehx
Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_41159
03016 Transfer RNA biogenesis [BR:
ehx03016
]
EMIHUDRAFT_41159
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EMIHUDRAFT_41159
Spliceosome [BR:
ehx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EMIHUDRAFT_41159
Transfer RNA biogenesis [BR:
ehx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EMIHUDRAFT_41159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
CMS1
Motif
Other DBs
NCBI-GeneID:
17258204
NCBI-ProteinID:
XP_005764592
JGI:
Emihu1_41159
UniProt:
A0A0D3ILM8
R1BQ11
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MAAFAELGLCPEIIRAVEELGWLLPTPVQQEAVPLILGGGDVMAAAETGSGKTGAFALPV
LQICHEALREQQMEKSASKMAAVAAAQAAAASAASVGLGADRDLLLSVEEGVRASAAGSW
AGARCGLGVRGGVHYFEVVQESEGGICRVGWAALNAKRELGKDAHGFGFGGTGKKSHGGR
FLDYGEPYGCGDVIGCLLDQVRGVISFSKNGRPLGEAFEVGPSLARQPLFPAVCLKGCAV
KLSLGEAPLAALPSGATPIARAAAEHAASNAASAPADPREAAVRGGDGCPTALILEPARE
LCEQVHRCVGDFSRFFTQPSLGAALLVGGVDGGRQLQQLKGGVDVVCGTPGRVADLVKQG
KLRLSAVQFFVLDEADRLLDTGNLDTILQLHAKLPRTGRTGGRLQTLLFSATLHTAEVRS
LAQRITCSPTLVDLKGAEHVPEAVHHVYVPVDPADATDGGAWADAARRVPTDGVHAQDVV
GEGAAAAAESGSEAVKRLKPLTLLRVVERLQLAQCLVFCRTNLDCDNLERFLHAAGGGKA
YRGKAEKGVESPYSCVVLAGQRPMEERRRNLAAFKAALNPRRPHRPAPPPPPPPFRGGGD
VRFLICTDVAARGLDIKELPCVINMTLPDKEEDYIHRVGRVGRAEVVGLAVSLVASGHRE
KVWYYDRRKWEGRPLSTKLAELGGCCIWYDEPALLRGVQKRLGG
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctttgcggagctcggcctctgtcccgagatcatccgcgccgtcgaggagctc
ggctggctcctgccgactccggtgcaacaggaggcggtcccgcttatcctcggaggcggc
gacgtcatggcggccgccgagaccgggtcgggaaagacgggcgcctttgccctcccggtg
ctgcagatttgccacgaggcgttgcgcgagcagcagatggagaagtcggcctccaagatg
gcggcggtcgccgcggcgcaggccgccgccgcgagcgccgcctctgtggggctcggcgcc
gaccgcgacctcctgctcagcgtggaggagggcgtgcgcgcgagcgctgcaggctcgtgg
gcgggtgcccggtgcgggctcggcgtgcgcggcggcgtgcactactttgaggtggtgcag
gagagcgagggcggcatctgccgtgtcggctgggcggcgctcaacgcgaagcgcgagctg
ggcaaggacgcgcacggcttcggctttggcgggacgggtaagaagtcgcacggcggcagg
ttcctcgactacggcgagccgtacgggtgcggcgacgtcatcggctgcctgctcgaccag
gtccgcggcgtgatcagcttctcaaagaacgggaggccgctcggcgaggccttcgaggtt
ggcccgagcctcgctcgccagccgctcttcccggcagtctgcctcaagggctgcgccgtc
aagctgagcctcggcgaggcgccgctcgccgcgctgccttccggggcgactccgatcgct
cgcgcggctgcagagcacgcggcctcgaacgcggcgtcggcgccggcagacccgcgagaa
gctgcggtgagaggcggcgacggctgcccgaccgccctcatcctcgagccggcgagagag
ctgtgcgagcaggtgcaccggtgcgtcggggacttctcgcgcttcttcacgcagccgtcg
ctcggcgccgcgctcctcgtcggcggcgtcgacggcggccgccagctgcagcagctcaag
ggcggggtggacgtggtgtgcggcacgcccggccgcgtcgcagacttggtcaagcagggc
aagttgcggctgtctgcggtgcagttcttcgtgctggacgaggcggaccggctgcttgac
acgggcaacctcgacacgatcctgcagttgcacgccaagctgccgcgcacagggcggacg
ggcggacggctgcagacgctcctcttctctgcgacgctgcacacggccgaggttcgctcg
ctcgcccagcggatcacgtgcagcccgaccctggtcgacctcaagggcgcagagcacgtt
cccgaggcggtgcaccacgtgtatgtcccggtcgacccggccgacgccaccgacgggggc
gcgtgggcggacgccgcgcggcgcgtgcccaccgacggggtgcacgcgcaggatgtggtc
ggcgagggggcggccgcggcggccgagagcggctcggaggcggtcaagcggctcaagccg
ctcacgctgctgcgggtggtggagcggctgcagctggcgcagtgtctcgtcttttgccgc
accaacctcgactgcgacaacctcgagcgcttcctgcacgcggcgggcggcggcaaggcc
taccgcggcaaggcggagaagggggtcgagagcccgtactcgtgcgtcgtgctcgcgggc
cagcggccgatggaggagcggcggcgcaacctcgccgccttcaaggccgccctcaacccg
cgccgcccccaccgccccgcccctccgcccccccccccccccttccgcggcggtggcgac
gtgcgtttcctcatctgcaccgacgtcgccgcgcgcggcctcgacatcaaggagctgccg
tgcgtcatcaacatgaccctgcccgacaaggaggaggactacatccaccgcgtcggccgg
gtgggccgtgccgaggtggttggactcgcggtgagcctcgtcgcgagcgggcaccgggag
aaggtgtggtactacgaccggcgcaagtgggagggcaggccactcagcacgaagctcgcc
gagctcggcggctgctgcatctggtacgacgagcccgccctgctgcgcggtgtgcagaag
cgactcggcggc
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integrated database retrieval system
