Emiliania huxleyi: EMIHUDRAFT_416776
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Entry
EMIHUDRAFT_416776 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMIHUDRAFT_416776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_416776
03012 Translation factors [BR:
ehx03012
]
EMIHUDRAFT_416776
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EMIHUDRAFT_416776
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
EMIHUDRAFT_416776
Translation factors [BR:
ehx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
EMIHUDRAFT_416776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
nSTAND3
TsaE
Motif
Other DBs
NCBI-GeneID:
17255230
NCBI-ProteinID:
XP_005761516
JGI:
Emihu1_416776
UniProt:
A0A0D3ICV2
R1BI67
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MRAAEEAKRASEPWRRMQSVRGKLPAAAKREEVLEGLRRADVLVVSGETGCGKTTQARRP
AHGALSSGARTSPRGTALQVPQFILDDEIAEGRGGVTSILCTQPRRLSAIGVAERVAAER
GERIGETVGYQIRLESKRSRDTRLLFCTTGILLRRLHGDGELRGVSHVIVDEVHERSLES
DFLLIILRDVLARRPGLKLVLMSATINASLFASYFGAGAPPPPAAPTLHIPGFTHPVREA
FLEEVLERTGHQIEEGGPYARRARGAEAAGGTEGLGFAEQAVARDEDGESWSEHVLRSLE
TMDEEKVNIDAMAALVSHLDTTRPEGAILVFMPGTREISALGGEGGGGGEAGARLLPLPL
HAGLSSAEQRRVFERPPAGRRKVVVSTNVAETSITIDDVVYVIDSGRVKETRYDAVNQLP
QLVETWVSQASRRQRRGRAGRVRPGEYFGMFTRERCGGLAAFTPPEMARVPLHELCLQIK
LLELGEIEPFLARALEPPSEAAVKAAIGQLGELQALDVKQSLTPLGRHLATLPVDVRIGK
MLLYACMLRCLEPALIIAAALSLRSPFLEPFDPDKRAAAREARQRFAADSRSDHLAVLRA
FREFRALQARGRRASGGWCRDSFLSQERLEGMAPVMSQFLELLLDIGFLPVGGEHYNANA
ASDPCLRAVLAAGLYPNVVRVVPPEAAPSSRPHYAGRARAPQIEGPSGLAVAVHPSSVNA
SGGDLRSRWLVYYEKVRTSQVFVRDSTMVTPYPLLLFGGELKVQHAQQTIAVDGWIEFSA
PPRVAVLFKQLRAELDKLLLAKIETPELDLPLTGRTIGTIVELLQQEVHHRDG
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggcggaggaggcgaagcgagcgtcggagccatggcggaggatgcagtccgtg
cgtggcaagctgcccgccgccgccaagcgggaggaggtgctggaagggttgcggagggca
gacgtgctcgtggtgagcggcgagaccgggtgcggcaagacgacgcaggcgagacggccg
gcacacggcgcactctcctcgggcgcacgcacctcaccgcgcgggaccgccttgcaggtg
ccccagttcatcctcgacgacgagatcgcagaggggcgtggcggcgtgacgagcatcctc
tgcacgcagccgcgccgcctgtcggccatcggcgtcgccgagcgggtggcggcggagcgc
ggcgagcggatcggagagacggttggctatcagatccggctcgagtccaagcggagccgc
gacacgaggctcctcttctgcacgaccggcatcctgctgcggcggctgcacggcgacggc
gagctgcgcggcgtgtcgcacgtgatcgtcgacgaggtgcacgagcgctccctcgagtcc
gacttcctgctcatcatcctgcgcgacgtgctcgccaggcggcccggcctcaagctcgtg
ctcatgtccgccacaatcaacgcgtccctcttcgcctcctacttcggcgcgggtgccccg
ccgcctcctgcggcgccgacgctccacatccctggcttcacgcacccggtgcgtgaggcc
ttcctcgaggaggtgctcgagaggaccggccaccagatcgaggagggggggccgtacgcg
aggagggcccgcggcgcggaggcggcgggcggcacggaggggctcggcttcgcggagcag
gctgtggcgcgagacgaggacggcgagagctggagcgagcacgtgctgcgctcgctcgag
acgatggacgaggagaaggtcaacatcgacgcgatggcggcgctcgtgagccacctcgac
acgacccgccccgagggcgccatcctcgtcttcatgcctggcacgcgcgagatctcggcg
ctgggcggcgagggcggcggcggcggcgaggcaggggcccggctcctgcctctgcctctc
cacgcgggcctctcctcggcggagcagcggcgcgtcttcgagcggccgccggcgggtcgg
cgcaaggttgtggtctcgacgaatgtcgccgagacgtcgatcacgatcgacgacgtcgtg
tacgtgatcgactctggccgcgtcaaggagacgcggtacgacgcggtcaaccagctgccg
cagctggtcgagacgtgggtctcgcaggcgtcgcgccggcagcggcgaggccgggcgggg
cgggtccggccgggcgagtacttcggcatgttcacgcgcgagcgctgcggggggctggcc
gccttcacgcctccggagatggcacgtgtccctctgcacgagctctgcctgcagatcaag
ctgctcgagctgggcgagatcgagcccttcctcgcgcgggcgctcgagccgccgtccgag
gcggcggtcaaggccgcgatcgggcagctgggcgagttgcaggcgctcgacgtcaagcag
agcctcacgccgctcggccgccacctcgccacgctgcccgtcgacgtgaggatcgggaag
atgctgctgtacgcgtgcatgctgcgctgcctcgagcccgcactcatcatcgccgccgcg
ctctcgctccgctcccccttcctcgagcccttcgacccggacaagcgcgccgccgcccgg
gaggcgcggcagcgcttcgcagccgactcgcgctcggaccacctcgcggtgctgcgggcc
ttccgcgagtttcgcgcgctgcaggcgcgcggccggcgcgcgagcggcggctggtgccgc
gactcgttcctctcgcaggagcggctcgaggggatggcgccggtgatgagtcagttcctc
gagctgctgctcgacatcggattcctgccggtgggcggcgagcactacaacgcgaacgca
gcctccgacccgtgcctgcgcgccgtgctcgccgctgggctctacccgaacgtggtgcga
gtggtgcctcccgaggcggccccgagctcgcggccgcactacgccggccgcgcgcgggcg
ccccagatcgaggggccgagcgggctggcggtggcggtgcacccgtcgtctgtcaacgcg
agcggcggcgacctacgctcccgctggctggtctactacgagaaggtgcgcacgtcgcag
gtctttgtgcgcgactcgacgatggtgacgccgtacccgctgcttctgtttggaggcgag
ctcaaggtccagcacgcgcagcagaccatcgctgtcgacggctggattgagttctccgcg
ccgccgcgagtggcggtcctcttcaagcagcttcgcgcagagttggacaagctgctgctc
gcaaagatcgagacgccagagctcgacctgccgctgaccggccgcacgatcggcaccatc
gtcgagctgctccagcaggaggtgcaccacagggacggctga
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