Emiliania huxleyi: EMIHUDRAFT_416925
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Entry
EMIHUDRAFT_416925 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMIHUDRAFT_416925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_416925
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_416925
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EMIHUDRAFT_416925
Messenger RNA biogenesis [BR:
ehx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EMIHUDRAFT_416925
DNA repair and recombination proteins [BR:
ehx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EMIHUDRAFT_416925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
17253880
NCBI-ProteinID:
XP_005760178
JGI:
Emihu1_416925
UniProt:
A0A0D3I914
R1DG59
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MNYYGYEFREGQREVVEAALAGKDIAVFWATGRGKSICYQLPALHTGRTVVVVSPLISLM
TDQVERLNNAVGQGRRQLAAFCGSAQLDKDVERRAFDGEFPLVFMSPEKLMADGLDRLAQ
LHARNPLLLFAIDEAHCVSEWGHDFRPQYRQLGELRQRMPTVPIMALTATAVPNVQRDIV
RSLALQNPYVQKQSSFRPNLAIKVSRKQAGLAESLGGLVQELLENNGAAVASSTLIYVPT
TNEAESVAAFLQHRQINADFYHGKRDAKERESVHVRFLSGQLPVVCATVAFGMGIDKPDI
RRVVHYGAPKTAEEYYQHIGRAGRDGGPARCEMIASDADFAKYSGEFYTKGLPHGQVERV
LESTEKLRGYANNTSDCRWVALLRLMGETAPFAACGTCDNCVRRKNFA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaactactacggctacgagttccgcgaggggcagcgggaggtcgtggaggccgcgctc
gccggcaaggacatcgctgtcttctgggcgacgggccgcggcaagtccatatgctaccag
ctgcccgcgctgcacacgggccgcacggtggtcgtcgtgtcgccgctcatctccctgatg
accgaccaggtcgagcgcctcaacaacgccgtcgggcaggggcggcgccagctggcggcc
ttctgcggctcggcgcagttggacaaggacgtcgagcggcgcgccttcgacggcgagttc
ccgctcgtgttcatgtcgcccgagaagctcatggccgatgggctcgaccgcctggcgcag
ctgcacgcgcgcaatcccctgctgctcttcgccatcgacgaggcgcactgcgtgagcgag
tgggggcacgactttcggccgcagtaccgccagctgggcgagctgcgccagcggatgccg
accgtgccgatcatggcgctgaccgccacggccgtgccgaacgtgcagcgggacatcgtg
cgctccctcgcgctgcagaacccgtacgtgcagaagcagtcgtccttccgccccaacctg
gccatcaaggtgtcgcgcaagcaggcggggctcgcagagagcctgggcggcctcgtgcag
gagctgctcgagaacaacggcgccgcggtggcctcgtcgacgctcatctacgtgcccacc
acgaacgaggccgagagcgtcgccgcattcctgcagcaccgccagatcaacgccgacttc
taccacggcaagcgcgacgccaaggagcgcgagagcgtgcacgtgcgcttcctctcgggc
cagctgccggtcgtctgcgcgacggtggccttcggcatgggcatcgacaagcccgacatc
cggcgcgtcgtgcactacggcgcgcccaagaccgcagaggagtactaccagcacatcggg
agagccgggcgcgacggcggtcccgcgcggtgcgagatgatcgcgagcgacgccgacttt
gccaagtacagcggcgagttctacaccaagggcctgccgcacggccaggtggagcgcgtg
ctcgagtcgaccgagaagctgcgcggctacgccaacaacacgagcgactgccggtgggtc
gcgctgctccgcctgatgggcgagaccgcgccctttgcggcgtgcggcacgtgcgacaac
tgtgtgcggcgcaagaatttcgcg
DBGET
integrated database retrieval system
