Emiliania huxleyi: EMIHUDRAFT_419321
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Entry
EMIHUDRAFT_419321 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03082
ATP-dependent chromatin remodeling
ehx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EMIHUDRAFT_419321
03083 Polycomb repressive complex
EMIHUDRAFT_419321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ehx03036
]
EMIHUDRAFT_419321
Enzymes [BR:
ehx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
EMIHUDRAFT_419321
Chromosome and associated proteins [BR:
ehx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
EMIHUDRAFT_419321
HDAC complexes
Sin3A-HDAC complex
EMIHUDRAFT_419321
BRAF-HDAC complex
EMIHUDRAFT_419321
REST complex
EMIHUDRAFT_419321
SHIP complex
EMIHUDRAFT_419321
MiDAC complex
EMIHUDRAFT_419321
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
EMIHUDRAFT_419321
Heterochromatin formation proteins
Other heterochromatin formation proteins
EMIHUDRAFT_419321
Chromatin remodeling factors
NuRD complex
EMIHUDRAFT_419321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
17264645
NCBI-ProteinID:
XP_005771529
JGI:
Emihu1_419321
UniProt:
R1DX48
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MGSYYYGPGHPMKPHRLAMTHNLILSYHLYRKMEVCRPHLATDEEMLQFHAAEYVDFLRR
VTPDNQPDFSKQLQRFTVGDDCPVFDGLYDYCRLYTGGSIDGAMRLNAGTADVAINWAGG
LHHAKRSEASGFCYVNDIVLAILQLLKVHARVLYLDIDIHHGDGVEEAFFTTDRVMTVSF
HKYGDFFFPGTGDVKDVGIRAGKYYSVNVPLRDGVNDDAYQRLFKPVMEEVMNLYRPSAL
VLQCGADSLAGDRLGWLHLPWTCDRLGCFNLSHRGHAECLRHMLSYNLPSLVLGGGGYTV
RNVARCWAYETAVVLGEELAEDLPWNDYYEHFAPDFSLQVTPSATMENANTRQYLDTVRQ
QVFENLRMLQGAPGVQMEAVPHDPEAAAAEADPDVRPVSGAAEHPGEHF
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctactactacggcccgggccatccgatgaagccgcaccggctggcgatgacg
cataacctcatcctctcgtaccacctctaccggaagatggaggtgtgccggccgcacctc
gccaccgacgaggagatgctccagttccacgccgcggagtacgtcgactttctgcggcga
gtgacgccggacaaccagcccgacttctcgaagcagctgcagcgcttcaccgtcggcgac
gactgccccgtctttgacggcctgtacgactactgccgcctgtacacgggaggctcgatc
gacggcgcgatgcgcctcaacgctggcactgccgacgtcgcgatcaactgggcgggcggg
ctgcaccacgcgaagcgatccgaggcgtccggcttctgctacgtcaacgacatcgtgctc
gcgatcctgcagctgctcaaggtgcacgctcgcgtgctctacctggacatcgacatccac
cacggcgacggcgtcgaggaggccttcttcacgacggaccgcgtgatgaccgtctccttt
cacaagtacggcgacttcttcttccccggcaccggcgacgtcaaggacgtcggcatcagg
gcgggcaagtactactcggtcaacgtgccgctgcgcgacggggtgaacgacgacgcgtac
cagcggctgttcaagccggtgatggaggaggtgatgaacctctaccgccccagcgcgctc
gtgctgcagtgcggcgccgactcgctcgcgggcgaccggctcggctggctccacctgccc
tggacctgcgaccggctcggctgcttcaacctgtcccaccgcggccacgccgagtgcttg
cggcacatgctgtcgtacaacctgccgtcgcttgtgctgggggggggcgggtacacggtg
cgcaacgtcgctcgctgctgggcgtacgagacggcggtggtgctgggagaggagctcgcc
gaggacctgccgtggaacgactactacgagcacttcgcccccgacttttcgctgcaggtg
acgccatcggcaaccatggagaacgcaaacacgcggcagtacctcgacaccgtgcggcag
caggtcttcgaaaacctgcggatgctgcagggcgcgccgggtgtgcagatggaggcggtg
ccccacgaccccgaggccgccgcggcagaggcagaccccgatgttcggcccgtaagcggg
gcggcggagcacccaggcgagcacttttga
DBGET
integrated database retrieval system