KEGG   Emiliania huxleyi: EMIHUDRAFT_42019
Entry
EMIHUDRAFT_42019  CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K14406  cleavage stimulation factor subunit 1
Organism
ehx  Emiliania huxleyi
Pathway
ehx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    EMIHUDRAFT_42019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_42019
Messenger RNA biogenesis [BR:ehx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     EMIHUDRAFT_42019
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_WDR75_2nd Beta-prop_IFT140_1st DSE1_N Beta-prop_DCAF4 Beta-prop_NWD2_C Tricorn_2nd
Other DBs
NCBI-GeneID: 17283729
NCBI-ProteinID: XP_005790888
JGI: Emihu1_42019
UniProt: A0A0D3KRS4
LinkDB
Position
Unknown
AA seq 294 aa
ARFSPDGKHLALGADDGTVRVAATGAAREHRTLEQLSVVPGATRTYSDHAKAINDVDFHP
RSPVLVSASADCTMRFFDYASGAPRASRQCTDTHAVHAVAFHPSGDHLLAATEHHAIHLY
DAATFRCYLAPQPSDHHLAPVADAHWSADGSLFASCGGDAIKVWDGVTNRCVRTIASAHL
GAPVNTLCFGGGGRTLLSCGADSCVRQWDVGSGKLLRVFEGAQQTRRTACCFSHDEALVL
SSDEKTGELVAWEASTGAQQARYAAHSMPVRWLAHSPVEAVAVSCGDDGLVHLW
NT seq 882 nt   +upstreamnt  +downstreamnt
gcgcgcttcagcccggacggcaagcacctcgctctcggagccgatgacggcaccgtccgc
gtcgccgccacgggcgccgcgcgcgagcaccggacgctcgagcagctctcggtggtcccg
ggcgcgacccgcacctactcggaccacgccaaggcgatcaacgacgtcgacttccaccct
cgctcgccggtgctcgtctctgcgtctgcagactgcacgatgcgcttcttcgactacgcc
tcgggcgcgccgcgcgcctcgcgccagtgcaccgacacgcacgcggtgcacgcggtcgcc
ttccacccgtcgggcgaccacctgctcgccgccacagagcaccacgccatccacctgtac
gacgcggcaaccttccgctgctacctcgcgccgcagccgagcgaccaccacctagcgccc
gtcgcggacgctcactggtcggcggacggctcgctcttcgcctcgtgcggcggcgacgcc
atcaaggtgtgggacggcgtgacgaaccgctgcgtccgcacgatcgcctcggcgcacctg
ggcgcgccggtcaacacgctctgctttgggggcggggggaggacgctgctctcgtgcggc
gccgactcgtgtgtgcggcagtgggacgtgggcagcggcaagctgctccgcgtctttgag
ggcgcgcagcagacgcgacggacggcctgctgcttctcgcacgatgaggccctcgtgctc
tcgtcggacgagaagacgggggagctggtggcgtgggaggcgagcacgggcgcgcagcag
gcgcgctacgccgcgcactcgatgccggtgcggtggctcgcgcactcgcccgtggaggcg
gtcgcggtgagctgcggcgacgacggactcgtccacctttgg

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