Emiliania huxleyi: EMIHUDRAFT_421023
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Entry
EMIHUDRAFT_421023 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
ehx
Emiliania huxleyi
Pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_421023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_421023
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_421023
03036 Chromosome and associated proteins [BR:
ehx03036
]
EMIHUDRAFT_421023
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
EMIHUDRAFT_421023
Spliceosome [BR:
ehx03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
EMIHUDRAFT_421023
Complex B
EMIHUDRAFT_421023
Complex C
U2 SnRNP specific factors
EMIHUDRAFT_421023
Chromosome and associated proteins [BR:
ehx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
EMIHUDRAFT_421023
TFTC complex
EMIHUDRAFT_421023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
17277337
NCBI-ProteinID:
XP_005784494
JGI:
Emihu1_421023
UniProt:
R1EZP8
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MANLGSAGGLHMYALTLQRASGVTGAVFGNFSAPRQQEIAVARGKILELCRPDDNGKVLT
VVASEVFGTIRSIATFRLTGGNRDYLVVGSDSGRIVILEFVADKGGWERVHCETFGKSGV
RRIVPGQYVATDPRGRAVMVGAVEKQKLVYILNRDSAARLTISSPLEAHKSASLTFALVG
VDVGFENPIFAALEVDMDEVETDPDTHEPLFEKVLTFYELDLGLNHVVRKWSDAVDPTAN
LLVAVPGGADGPGGVLVCAENFIVYKNHGHADKRCPLPRRKDLPPEQGLLLVASAVHRQR
DLFFIVVQSEAGDLYKVTVQTDGEDKDAVSEVKVRYLDSVPTCVALCILRSGFLFCASEF
GNSGFYQFQGVGEDDESPSCSSLTFEGGDEAAAAAARARRGAVVELEPRPLRNLLHVDDI
DSLCPMIDAKLLELGERGAPPSLVSLCGRSARSTLRVVQHGLSVSDLAVSELPGNPNAVW
TVKKRKSDQFDAYIVVSFVNATLVLSIGETVEEVSDSGLKPDTPTLVVALLGEDSLVQVY
PAGIYHVRADGRASEWRPPRGKPIVQASANNRQVAVGLQGGEVVYFELDETGTLAELDKK
DPRPSRRRDLGLEVSCLELGRVPDGRARSRFLAVGGLDSTIRILSLDPDECMNVLAVLAL
PAQAESAALASLQLGRPGTPPALFLCIGLSNGVMLRARIDQRSGQLSDTRTRFLGGKPAR
LFRTSLGGGDGVLALSSRSWVLYSLAGALHTTPLSYVPLDAGASFASEHCPEGLVAIAGN
TLRIVSVDRLGDAFTSEAVPLRYTPRRMAHHSVSGHVVVIESDHNALSADEKEEEADGML
MEACVGVPRGGAGKWASAIRVLDLAARRTLSVIELAENEAAVSVAAVPLRERGGETFIVV
GTVKDMTLHPRTLTCGYLHVYQFAEGNTQLNLVHKTQVEDVPAAIAPFGGRVLVGVGSGL
RIYEMGAKKLLRKAELKGLPTMVQSLHVISSQRIVVGDLSESFHFVHYKRADNTLTVFAD
DIAPRWLTAACPLDAHSLAGADKFGNIFVCRLPREVSDDADDAALMAASAGRDDLALNGA
PSKAEEVVQFHVGETVTSLQKVSLGPGCAEVILYTTLFGGIGALLPLTSREDVELLTALE
MHVRQEAPPLCGREQLFFRSAYFPVKACVDGDYLTLFNSLPAAEQKTIADDLDRTPAEIS
KKLEELAARIL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctggggtctgctggcggccttcacatgtacgcgctgacgctgcagcgcgcc
tctggcgtgaccggggcggtgttcggcaacttctcggcgccgcggcagcaggagattgcc
gttgcacgcggcaaaatcttggagctgtgcaggccagacgacaacggaaaggtgctgacg
gtcgtcgcgtcggaggtgttcggaacgatccgctccatcgcaaccttccgcctcaccggc
ggcaaccgcgactacctcgtcgtcggctccgactcgggaaggattgttattctcgagttt
gtcgctgacaagggcgggtgggagcgcgtgcactgcgagacgtttggcaagtcgggcgtg
aggcgcattgtgccgggccagtacgtggcgacggacccgcgcgggcgggcggtgatggtg
ggcgcggtggagaagcagaagctggtgtacatcctcaatcgcgactccgccgcgcgcctc
accatctcctctcccctcgaggcgcacaagtcggccagcctcacctttgcgctcgtcggc
gtcgacgtcggcttcgagaacccgatctttgcggccctcgaagtcgacatggacgaggtg
gagacggacccggacacgcacgagcccctcttcgagaaggttctcaccttctacgagctc
gacctcggcctcaaccacgtcgtccgcaagtggtccgacgccgtcgacccgaccgcaaac
ctgctggtcgccgtgccgggcggagcggacgggccgggcggggtgctcgtgtgcgccgag
aacttcatcgtgtacaagaaccacgggcacgcggacaagcggtgccctctgccgcggcgg
aaggacctgccgcccgagcaggggctgctgctggtcgcctccgccgtccaccgccagcgt
gacctcttcttcatcgtcgtgcagagcgaggcgggcgacctgtacaaggtgacggtgcag
acggacggcgaggacaaggacgcggtcagcgaggtcaaggtgcgctacctcgactcggtg
cccacctgcgtcgccctctgcatcctccgctcgggcttcctcttttgcgcctccgagttt
ggcaactctggcttctaccagttccagggcgtcggcgaggacgacgagtcgccctcgtgc
tcctcgctcaccttcgaggggggcgacgaggcggccgccgcggcggctcgcgcgcggcgc
ggtgccgtcgtcgagctcgagccgcgcccgctgcgcaacctgctgcacgtcgacgacatc
gactcgctctgcccgatgatcgacgcaaagctgctcgagctgggggagcgaggcgcgcca
ccctcgctcgtctcgctctgcggccgctcggcgcggtcgacgctgcgcgtggtgcagcac
ggtctctcggtctccgacctggctgtctctgagcttcccggcaacccgaacgcggtctgg
acggtcaagaagcgcaagagcgaccagttcgacgcgtacatcgtcgtctcgttcgtcaac
gcgacgctggtcctctcgatcggagagacggtcgaggaggtgagcgactcgggcctcaag
cccgacacgccgaccctcgtcgtcgcgctcctcggcgaggactcgctcgtgcaggtctac
ccggcgggcatctaccacgtgcgcgccgacggccgtgcgtccgagtggcggcctccgcgc
ggcaagccgatcgtgcaggcgtcggccaacaaccggcaggtcgcggtcgggctgcagggc
ggcgaggtcgtctacttcgagctcgacgagacgggcaccctcgccgagctcgacaagaag
gaccctcgcccctcgcggcggcgcgacctcggcctcgaggtgtcgtgcctcgagctcggc
cgcgtgcccgacggccgcgcgcgctcgcgattcctcgccgtcggcgggctcgactcgacg
atccgcatcctctcgctcgacccggacgagtgcatgaacgtgctcgccgtcctcgcgctg
cccgcgcaggccgagtcggcggcgctcgcctcgctgcagctcggccggcccggcacgccg
cccgccctcttcctctgcatcggcctgagcaacggcgtgatgctgcgcgcgcgcatcgac
cagcggtcaggccagctctcggacacgcgcacccgtttcctcggcggcaagccagcgcgc
ctcttccgcacctcgctcggcggcggcgacggcgtgctcgccctctcgtcgcgttcgtgg
gtgctctactcgctcgcgggcgcgctgcacacgacgccgctctcgtatgtgccgctcgac
gcgggcgcgtccttcgcgtcggagcactgccccgagggcctcgtcgccatcgcgggcaac
acgctgcgcatcgtctccgtcgaccggctcggcgacgccttcacctcggaggcggtgccg
ctgcggtacacgccgcgccggatggcacaccactccgtctccggccacgtggtggtcatc
gagagcgaccacaacgcgctctccgccgacgagaaggaggaggaggcggacggcatgctg
atggaggcgtgcgtcggcgtgccccggggcggggcgggcaagtgggcctcggccatccgc
gtgctcgatttggcggcgcggcgcaccctctccgtcatcgagctcgctgagaacgaggcg
gccgtctcggtggcggcggtgccgctgcgcgagcgcggcggcgagaccttcatcgtcgtc
ggcaccgtcaaagacatgacgctgcacccgcgcacgctgacctgcggctacctgcacgtg
taccagttcgcagagggcaacacgcagctcaacctcgtccacaagacgcaggtggaggac
gtgcccgccgccatcgcgccgttcggcggccgcgtgctcgtcggcgtcggcagcgggctg
cgcatctacgagatgggcgcgaagaagctgctgcgcaaggcggagctcaaggggctgccg
acgatggtgcagtcgctgcacgtcatctcgtcgcagcgaatcgtcgtcggcgacctctcc
gagtccttccactttgtgcactacaagcgcgccgacaacacgctcaccgtcttcgccgat
gacatcgcgccgcgctggctcaccgccgcctgcccgctcgacgcgcactcgctcgcgggc
gccgacaagttcggcaacatcttcgtctgccgcctgccgcgcgaggtgagcgacgacgcg
gacgacgcggcgctgatggcggcgagcgccggccgcgacgacctcgcgctcaatggcgcg
ccgtccaaggcggaggaggttgtgcagttccacgtgggcgagacggtcacgtcgctgcag
aaggtgtcgctcgggccgggctgcgccgaggtgatcctctacacgaccctcttcggcggc
atcggcgcgctgctcccgctcacctcgcgcgaggacgtcgagctgctcaccgccctcgag
atgcacgtgcggcaggaggcgccgccgctctgcggccgcgagcagctcttcttccgctcc
gcctacttccccgtcaaggcgtgcgtcgacggcgactacctgacgctcttcaactcgctg
cccgccgccgagcagaagacgatagccgacgacctcgaccgaacgcccgccgagatctcc
aaaaagctcgaggagctcgccgcgcgcatcctgtag
DBGET
integrated database retrieval system