KEGG   Emiliania huxleyi: EMIHUDRAFT_421023
Entry
EMIHUDRAFT_421023 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K12830  splicing factor 3B subunit 3
Organism
ehx  Emiliania huxleyi
Pathway
ehx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EMIHUDRAFT_421023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehx03021]
    EMIHUDRAFT_421023
   03041 Spliceosome [BR:ehx03041]
    EMIHUDRAFT_421023
   03036 Chromosome and associated proteins [BR:ehx03036]
    EMIHUDRAFT_421023
Transcription machinery [BR:ehx03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     EMIHUDRAFT_421023
Spliceosome [BR:ehx03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    EMIHUDRAFT_421023
 Complex B
    EMIHUDRAFT_421023
 Complex C
   U2 SnRNP specific factors
    EMIHUDRAFT_421023
Chromosome and associated proteins [BR:ehx03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     EMIHUDRAFT_421023
    TFTC complex
     EMIHUDRAFT_421023
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 17277337
NCBI-ProteinID: XP_005784494
JGI: Emihu1_421023
UniProt: R1EZP8
LinkDB
Position
Unknown
AA seq 1211 aa
MANLGSAGGLHMYALTLQRASGVTGAVFGNFSAPRQQEIAVARGKILELCRPDDNGKVLT
VVASEVFGTIRSIATFRLTGGNRDYLVVGSDSGRIVILEFVADKGGWERVHCETFGKSGV
RRIVPGQYVATDPRGRAVMVGAVEKQKLVYILNRDSAARLTISSPLEAHKSASLTFALVG
VDVGFENPIFAALEVDMDEVETDPDTHEPLFEKVLTFYELDLGLNHVVRKWSDAVDPTAN
LLVAVPGGADGPGGVLVCAENFIVYKNHGHADKRCPLPRRKDLPPEQGLLLVASAVHRQR
DLFFIVVQSEAGDLYKVTVQTDGEDKDAVSEVKVRYLDSVPTCVALCILRSGFLFCASEF
GNSGFYQFQGVGEDDESPSCSSLTFEGGDEAAAAAARARRGAVVELEPRPLRNLLHVDDI
DSLCPMIDAKLLELGERGAPPSLVSLCGRSARSTLRVVQHGLSVSDLAVSELPGNPNAVW
TVKKRKSDQFDAYIVVSFVNATLVLSIGETVEEVSDSGLKPDTPTLVVALLGEDSLVQVY
PAGIYHVRADGRASEWRPPRGKPIVQASANNRQVAVGLQGGEVVYFELDETGTLAELDKK
DPRPSRRRDLGLEVSCLELGRVPDGRARSRFLAVGGLDSTIRILSLDPDECMNVLAVLAL
PAQAESAALASLQLGRPGTPPALFLCIGLSNGVMLRARIDQRSGQLSDTRTRFLGGKPAR
LFRTSLGGGDGVLALSSRSWVLYSLAGALHTTPLSYVPLDAGASFASEHCPEGLVAIAGN
TLRIVSVDRLGDAFTSEAVPLRYTPRRMAHHSVSGHVVVIESDHNALSADEKEEEADGML
MEACVGVPRGGAGKWASAIRVLDLAARRTLSVIELAENEAAVSVAAVPLRERGGETFIVV
GTVKDMTLHPRTLTCGYLHVYQFAEGNTQLNLVHKTQVEDVPAAIAPFGGRVLVGVGSGL
RIYEMGAKKLLRKAELKGLPTMVQSLHVISSQRIVVGDLSESFHFVHYKRADNTLTVFAD
DIAPRWLTAACPLDAHSLAGADKFGNIFVCRLPREVSDDADDAALMAASAGRDDLALNGA
PSKAEEVVQFHVGETVTSLQKVSLGPGCAEVILYTTLFGGIGALLPLTSREDVELLTALE
MHVRQEAPPLCGREQLFFRSAYFPVKACVDGDYLTLFNSLPAAEQKTIADDLDRTPAEIS
KKLEELAARIL
NT seq 3636 nt   +upstreamnt  +downstreamnt
atggcgaacctggggtctgctggcggccttcacatgtacgcgctgacgctgcagcgcgcc
tctggcgtgaccggggcggtgttcggcaacttctcggcgccgcggcagcaggagattgcc
gttgcacgcggcaaaatcttggagctgtgcaggccagacgacaacggaaaggtgctgacg
gtcgtcgcgtcggaggtgttcggaacgatccgctccatcgcaaccttccgcctcaccggc
ggcaaccgcgactacctcgtcgtcggctccgactcgggaaggattgttattctcgagttt
gtcgctgacaagggcgggtgggagcgcgtgcactgcgagacgtttggcaagtcgggcgtg
aggcgcattgtgccgggccagtacgtggcgacggacccgcgcgggcgggcggtgatggtg
ggcgcggtggagaagcagaagctggtgtacatcctcaatcgcgactccgccgcgcgcctc
accatctcctctcccctcgaggcgcacaagtcggccagcctcacctttgcgctcgtcggc
gtcgacgtcggcttcgagaacccgatctttgcggccctcgaagtcgacatggacgaggtg
gagacggacccggacacgcacgagcccctcttcgagaaggttctcaccttctacgagctc
gacctcggcctcaaccacgtcgtccgcaagtggtccgacgccgtcgacccgaccgcaaac
ctgctggtcgccgtgccgggcggagcggacgggccgggcggggtgctcgtgtgcgccgag
aacttcatcgtgtacaagaaccacgggcacgcggacaagcggtgccctctgccgcggcgg
aaggacctgccgcccgagcaggggctgctgctggtcgcctccgccgtccaccgccagcgt
gacctcttcttcatcgtcgtgcagagcgaggcgggcgacctgtacaaggtgacggtgcag
acggacggcgaggacaaggacgcggtcagcgaggtcaaggtgcgctacctcgactcggtg
cccacctgcgtcgccctctgcatcctccgctcgggcttcctcttttgcgcctccgagttt
ggcaactctggcttctaccagttccagggcgtcggcgaggacgacgagtcgccctcgtgc
tcctcgctcaccttcgaggggggcgacgaggcggccgccgcggcggctcgcgcgcggcgc
ggtgccgtcgtcgagctcgagccgcgcccgctgcgcaacctgctgcacgtcgacgacatc
gactcgctctgcccgatgatcgacgcaaagctgctcgagctgggggagcgaggcgcgcca
ccctcgctcgtctcgctctgcggccgctcggcgcggtcgacgctgcgcgtggtgcagcac
ggtctctcggtctccgacctggctgtctctgagcttcccggcaacccgaacgcggtctgg
acggtcaagaagcgcaagagcgaccagttcgacgcgtacatcgtcgtctcgttcgtcaac
gcgacgctggtcctctcgatcggagagacggtcgaggaggtgagcgactcgggcctcaag
cccgacacgccgaccctcgtcgtcgcgctcctcggcgaggactcgctcgtgcaggtctac
ccggcgggcatctaccacgtgcgcgccgacggccgtgcgtccgagtggcggcctccgcgc
ggcaagccgatcgtgcaggcgtcggccaacaaccggcaggtcgcggtcgggctgcagggc
ggcgaggtcgtctacttcgagctcgacgagacgggcaccctcgccgagctcgacaagaag
gaccctcgcccctcgcggcggcgcgacctcggcctcgaggtgtcgtgcctcgagctcggc
cgcgtgcccgacggccgcgcgcgctcgcgattcctcgccgtcggcgggctcgactcgacg
atccgcatcctctcgctcgacccggacgagtgcatgaacgtgctcgccgtcctcgcgctg
cccgcgcaggccgagtcggcggcgctcgcctcgctgcagctcggccggcccggcacgccg
cccgccctcttcctctgcatcggcctgagcaacggcgtgatgctgcgcgcgcgcatcgac
cagcggtcaggccagctctcggacacgcgcacccgtttcctcggcggcaagccagcgcgc
ctcttccgcacctcgctcggcggcggcgacggcgtgctcgccctctcgtcgcgttcgtgg
gtgctctactcgctcgcgggcgcgctgcacacgacgccgctctcgtatgtgccgctcgac
gcgggcgcgtccttcgcgtcggagcactgccccgagggcctcgtcgccatcgcgggcaac
acgctgcgcatcgtctccgtcgaccggctcggcgacgccttcacctcggaggcggtgccg
ctgcggtacacgccgcgccggatggcacaccactccgtctccggccacgtggtggtcatc
gagagcgaccacaacgcgctctccgccgacgagaaggaggaggaggcggacggcatgctg
atggaggcgtgcgtcggcgtgccccggggcggggcgggcaagtgggcctcggccatccgc
gtgctcgatttggcggcgcggcgcaccctctccgtcatcgagctcgctgagaacgaggcg
gccgtctcggtggcggcggtgccgctgcgcgagcgcggcggcgagaccttcatcgtcgtc
ggcaccgtcaaagacatgacgctgcacccgcgcacgctgacctgcggctacctgcacgtg
taccagttcgcagagggcaacacgcagctcaacctcgtccacaagacgcaggtggaggac
gtgcccgccgccatcgcgccgttcggcggccgcgtgctcgtcggcgtcggcagcgggctg
cgcatctacgagatgggcgcgaagaagctgctgcgcaaggcggagctcaaggggctgccg
acgatggtgcagtcgctgcacgtcatctcgtcgcagcgaatcgtcgtcggcgacctctcc
gagtccttccactttgtgcactacaagcgcgccgacaacacgctcaccgtcttcgccgat
gacatcgcgccgcgctggctcaccgccgcctgcccgctcgacgcgcactcgctcgcgggc
gccgacaagttcggcaacatcttcgtctgccgcctgccgcgcgaggtgagcgacgacgcg
gacgacgcggcgctgatggcggcgagcgccggccgcgacgacctcgcgctcaatggcgcg
ccgtccaaggcggaggaggttgtgcagttccacgtgggcgagacggtcacgtcgctgcag
aaggtgtcgctcgggccgggctgcgccgaggtgatcctctacacgaccctcttcggcggc
atcggcgcgctgctcccgctcacctcgcgcgaggacgtcgagctgctcaccgccctcgag
atgcacgtgcggcaggaggcgccgccgctctgcggccgcgagcagctcttcttccgctcc
gcctacttccccgtcaaggcgtgcgtcgacggcgactacctgacgctcttcaactcgctg
cccgccgccgagcagaagacgatagccgacgacctcgaccgaacgcccgccgagatctcc
aaaaagctcgaggagctcgccgcgcgcatcctgtag

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