KEGG   Emiliania huxleyi: EMIHUDRAFT_424080
Entry
EMIHUDRAFT_424080 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
ehx  Emiliania huxleyi
Pathway
ehx03030  DNA replication
ehx03410  Base excision repair
ehx03420  Nucleotide excision repair
ehx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EMIHUDRAFT_424080
   03410 Base excision repair
    EMIHUDRAFT_424080
   03420 Nucleotide excision repair
    EMIHUDRAFT_424080
   03430 Mismatch repair
    EMIHUDRAFT_424080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ehx03032]
    EMIHUDRAFT_424080
   03036 Chromosome and associated proteins [BR:ehx03036]
    EMIHUDRAFT_424080
   03400 DNA repair and recombination proteins [BR:ehx03400]
    EMIHUDRAFT_424080
DNA replication proteins [BR:ehx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    EMIHUDRAFT_424080
  DNA Replication Termination Factors
   ELG1-RFC complex
    EMIHUDRAFT_424080
Chromosome and associated proteins [BR:ehx03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    EMIHUDRAFT_424080
DNA repair and recombination proteins [BR:ehx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     EMIHUDRAFT_424080
  Check point factors
   HRAD17(Rad24)-RFC complex
    EMIHUDRAFT_424080
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_16 AAA_22 RuvB_N Rad17 AAA_24 AAA_30 AAA_11 ResIII AAA_2 Mg_chelatase AAA_assoc_2 AAA_5 DEAD Rep_fac_C AAA_19 DNAX_ATPase_lid AAA_7 DUF815 AAA_3 SLFN-g3_helicase Gp44_lid nSTAND3
Other DBs
NCBI-GeneID: 17274590
NCBI-ProteinID: XP_005781473
JGI: Emihu1_424080
UniProt: A0A0D3JZV9 R1F741
LinkDB
Position
Unknown
AA seq 334 aa
MASSSASTTDKRPWVEKYRPKSMDEVSHQEEVTAALRNAIESNNLPHLIFYGPPGTGKTS
TILAAARSLFGDELRSRVMELNASDERGIAVVRNKIKSFAQVSVGTGGTSRGLPPYKLII
LDEADSMTSDAQSALRRTMETYSKVTRFCIICNYVSRLIPPIASRCAKFRFKPLPHASMV
ERLSAIASAEGVAIDEPTLRELMRVSEGDMRRAIQLLQSLHRLHGDEIGPQAVLDLSAAL
PDEKIGETADRWLPPEHGETFAVCRANDFSKLGALSASLSALTGVLASSLLADGYPVDQI
IAQMLEHIAASSDLGDRQKAQVATDIAAPATTCS
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggcttcctcctccgcctcaacgaccgacaagcggccttgggtcgagaaataccggccc
aagtcgatggacgaggtctcgcaccaggaggaggtgacggcggcgctgcgcaacgccatc
gagtcgaacaacctgcctcacctgatcttttacggcccgcccggcacgggcaagacctcg
acgatcctcgcggccgcgcgcagcctcttcggcgacgagctccgctcgcgcgtgatggag
ctcaacgcctcggacgagcgcggcatcgccgtcgtgcgcaacaagatcaagtcgttcgcg
caggtctccgtcggcacgggcggcaccagccgtggcctcccaccgtacaaactaatcatc
ctcgacgaggccgactcgatgaccagcgacgcgcagtcggcgcttcgccgcacgatggag
acgtactccaaggtgacccgcttctgcatcatctgcaactacgtctcgcgcctcatcccc
ccgatcgcctcgcgctgcgccaagttccgcttcaagcctctgccgcacgcctcgatggtc
gagcgcctgtcggccatcgcctccgcagagggcgtcgccatcgacgagccgaccttgcgc
gagctcatgcgcgtctcggagggcgacatgcggcgcgccatccagctgctccagtcgctc
caccgcctgcacggcgacgagatcgggccgcaagcagtgctcgacctgtccgccgccctc
ccggacgagaagatcggcgagaccgccgatcgttggctgccgcccgagcatggcgagacc
ttcgctgtctgccgcgcaaacgacttttcaaagctgggcgcgctctccgcctccctctcc
gcactcaccggcgtactcgcctcctccctcctcgccgacggttaccccgtcgaccagatc
atcgcgcagatgctcgagcacatcgcagcctcgagcgacctcggagaccgccaaaaggcg
caagtcgccacggacatcgccgcgccggcgactacctgcagctga

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