Emiliania huxleyi: EMIHUDRAFT_429118
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Entry
EMIHUDRAFT_429118 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_429118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_429118
03009 Ribosome biogenesis [BR:
ehx03009
]
EMIHUDRAFT_429118
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EMIHUDRAFT_429118
Spliceosome [BR:
ehx03041
]
Complex A
U1 snRNP components
U1 related factors
EMIHUDRAFT_429118
Complex B
EMIHUDRAFT_429118
Ribosome biogenesis [BR:
ehx03009
]
Eukaryotic type
Pre-60S particles
Helicases
EMIHUDRAFT_429118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
WW
ResIII
P-loop_SecA
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
17282405
NCBI-ProteinID:
XP_005789564
JGI:
Emihu1_429118
UniProt:
A0A0D3KN00
R1FDM8
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MWNTALDGAGHTYYWHSETGASQYEKPADFDPAKAQNSGSYTQYQNGSGGGGGGGGGGYG
GGGGGGGYGGGGGGYGGGGYGGGGGGYDRDAIGLQFSRPANTNYKDVQDQGFWKENDLKV
YGGSPPPFLSFEEAQLPRPIMDAIAKAGFTKPSVIQSQSWPAAMAKRDLIGVAKTGSGKT
LGFLVPGFMYIQQQRVNPMQGPSLLTLAPTRELAMQIEVECQKFGLPLGIRSVCCYGGAP
KGQQLMAMRQGCHVVIGTPGRINDFLESGQIQLHQVAYLVFDEADRMLDMGFEPQIRKIV
RQVPPQRQTLFYTATWPKQVRALAYEFMRSPVQVEVGDINSLNANKDITQYVHVTRGPGE
KQQMLMRIFQSLEAGTRTLVFTSTKRMADQLGMQLGRQIGSGVIHGDKDQREREAVLADF
KSGRRPVMIATDVAARGIDVKECKAVINYDFPGNIEDYVHRIGRTGRAGAKGEAHTFMDG
QKDGKYARALCEIMVKADQAIPGPIAQMAGLRSGTYRPAVLHRGGGGGGGSGGGGGGGGG
GGGGGGGGSTRASNRPMERATGDAGKRSAADRTRRSKSPEQHLATVSGAASIFLSLVTDA
STDTALVSSPSLAVLHLSTYLPTDKGESTGRTDHASLSHRGGSQAKLVL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaccgcgctcgacggcgcagggcacacctactattggcactctgagacgggc
gcgtcgcagtacgagaagcccgccgactttgaccccgccaaggcgcagaactcgggctcg
tacacccaataccaaaacggcagcggcggcggaggaggaggtggcggaggagggtatggc
ggcggtggcggcggcggcgggtacggcggcggcggcggcgggtacggcggcggcgggtac
ggcggcggcggcggcggctacgaccgcgacgccatcgggctccagttctcgcgccccgcc
aacacaaactacaaggacgtgcaggaccaaggcttctggaaggagaacgacctcaaggtg
tacggcggctcgccgccgccgttcctctccttcgaggaggcgcagctgccgcggccgatc
atggacgccatcgccaaggccggcttcaccaagccctccgtcatccagtcccagtcgtgg
cccgcggcgatggccaagcgcgacttgattggcgtcgccaagaccggctcgggcaagacg
ctcggcttcctcgtgccgggtttcatgtacatccagcagcagcgcgtcaacccgatgcag
ggaccgtccctgctcacgctggcgccgacgcgcgagctcgccatgcagatcgaggtcgag
tgccaaaagtttgggctgccgctcgggatccggtccgtctgctgctacggcggcgcgccc
aaggggcagcagctgatggcgatgcggcaggggtgccacgtggtaatcggcacgccgggg
cggatcaacgacttcctcgagtcgggccagatccagctgcaccaggtcgcctaccttgtg
tttgacgaggcggaccggatgctcgacatgggctttgagccgcagatccgcaagattgtg
cgccaagtgccgccgcagcggcagacgctcttctacacggccacgtggccaaagcaggtg
cgcgcgctggcctacgagttcatgcggtcgcctgtgcaggtcgaggtgggcgacatcaac
tcgctcaacgcaaacaaggacatcacgcagtacgtgcacgtgacgcgcgggccgggcgag
aagcagcagatgctcatgcgcatcttccagtcgctcgaggcgggcacgcgcacgctggtc
ttcacgtcgaccaagcggatggcggaccagctgggcatgcagctcggccgccagatcggc
agcggcgtcatccacggcgacaaggaccagcgcgagcgcgaggctgtcctcgccgacttc
aagagcggccgccggccagtgatgatcgcgaccgacgtggccgcgcgcggcatcgacgtc
aaggagtgcaaggccgtcatcaactacgacttcccgggcaatattgaggactatgtccac
cgcatcggccgcaccggccgcgccggcgccaagggggaggcgcacaccttcatggacggg
caaaaggacggcaagtacgcgcgcgcgctgtgcgagatcatggtcaaggcggaccaggcg
atcccggggccaatcgcgcagatggcaggcctgcgcagcgggacgtaccgccccgccgtg
ctgcaccgcggcggcggcggcggcggcggcagcggcggcggcggcggcggcggcggcggc
ggcggcggcggcggcggcggtggaagcactcgtgcaagcaaccggccgatggaacgcgcg
acgggcgatgcgggcaaacgatcggcggctgatcgcactcgtcgatcgaagtcgcccgag
cagcatctcgccaccgtttcgggggcagcgagtatttttctttctctggttaccgacgcg
tccaccgataccgcgttggtgtccagtccgagcctggctgttcttcacctttctacctac
ctacctaccgacaagggagaaagcacggggaggacagaccacgcctcactttctcacagg
ggggggagccaggcaaagcttgtgctgtga
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