Emiliania huxleyi: EMIHUDRAFT_433653
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Entry
EMIHUDRAFT_433653 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03013
Nucleocytoplasmic transport
ehx03015
mRNA surveillance pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_433653
09122 Translation
03013 Nucleocytoplasmic transport
EMIHUDRAFT_433653
03015 mRNA surveillance pathway
EMIHUDRAFT_433653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_433653
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_433653
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EMIHUDRAFT_433653
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EMIHUDRAFT_433653
Spliceosome [BR:
ehx03041
]
Complex C
Other components
EJC/TREX
EMIHUDRAFT_433653
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
EMIHUDRAFT_433653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
Cas3-like_C_2
Transcrip_reg
Motif
Other DBs
NCBI-GeneID:
17283494
NCBI-ProteinID:
XP_005790653
JGI:
Emihu1_433653
UniProt:
A0A0D3KR39
R1FXH6
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MADAELNDDDLVDYEEEEAEETKPQEEVKKGGTYSGIHASGFRDFLLKPELLRAVVDCGF
EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLATLHQLEAKENTVCCLVLCHAREL
AYQICNEFERFSRYLPDVMMFSATLSTDMRAVCKKFMQDPMEIYVDDSKLTLHGLQQHYV
KLAENEKNRKLNELLDALEFNQAPSQRLFVKSVSRANALDKLLQECNFPSVAIHGSMKQE
ERIKLYQNFKDFKHRILVSTDIWGRGIDIERVNIVVNYDMPDSSDTYLHRVGRAGRFGTK
GLAITFASTDEDAKILEDVSITQLPETIDVTSYMTA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcggagctcaacgacgacgaccttgtcgattacgaggaggaggaggctgag
gagaccaagccgcaagaggaagtcaagaagggcggcacctactctggcatccacgcctcc
ggcttccgcgactttctgctcaagcccgagctgctgcgcgccgtcgtcgactgcggcttc
gagcacccctccgaagtgcagcacgagtgcatcccgcaggccatcctcggcatggacgtg
atctgccaggccaagtcgggcatgggcaagacggccgtgttcgtgctcgcgacgctccac
cagctggaggccaaggagaacaccgtctgctgtctcgtcctctgccatgcgcgcgagctc
gcgtaccagatctgcaacgagttcgagcgcttctcgcgctacttgcccgacgtgatgatg
ttctccgccaccctctcgacggacatgcgcgccgtctgcaagaagttcatgcaggacccg
atggagatctacgtcgacgactccaagctgacgctgcacggcctgcagcagcactacgtc
aagctcgccgagaacgagaagaaccgaaagctcaatgagctcctcgacgcgctcgagttc
aaccaggcgccaagccagcggctcttcgtcaagtccgtctcgcgggcgaacgcgctcgac
aagctgctgcaggagtgcaacttcccgtcggtggccatccacgggtcgatgaagcaggag
gagcgcatcaagctctaccaaaacttcaaggacttcaagcaccgcatcctcgtctcgacc
gacatctggggccgcggcatcgacatcgagcgggtcaacatcgtcgtcaactacgacatg
cccgactcgtcggacacctacctgcaccgcgtcggccgcgcgggccgcttcggcacaaag
ggcctcgcgatcaccttcgcctccaccgacgaggacgcgaagatcctcgaggacgtgtcc
atcacgcagctgccagagacgatcgacgtcacctcctacatgaccgcatga
DBGET
integrated database retrieval system
