Emiliania huxleyi: EMIHUDRAFT_437972
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Entry
EMIHUDRAFT_437972 CDS
T02915
Symbol
Rab5b-1
Name
(RefSeq) GTP-binding protein
KO
K07889
Ras-related protein Rab-5C
Organism
ehx
Emiliania huxleyi
Pathway
ehx04144
Endocytosis
ehx04145
Phagosome
ehx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
EMIHUDRAFT_437972 (Rab5b-1)
04145 Phagosome
EMIHUDRAFT_437972 (Rab5b-1)
04148 Efferocytosis
EMIHUDRAFT_437972 (Rab5b-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ehx04131
]
EMIHUDRAFT_437972 (Rab5b-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ehx04147
]
EMIHUDRAFT_437972 (Rab5b-1)
04031 GTP-binding proteins [BR:
ehx04031
]
EMIHUDRAFT_437972 (Rab5b-1)
Membrane trafficking [BR:
ehx04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
EMIHUDRAFT_437972 (Rab5b-1)
Endosome - Lysosome transport
EMIHUDRAFT_437972 (Rab5b-1)
Exosome [BR:
ehx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EMIHUDRAFT_437972 (Rab5b-1)
Exosomal proteins of other body fluids (saliva and urine)
EMIHUDRAFT_437972 (Rab5b-1)
Exosomal proteins of colorectal cancer cells
EMIHUDRAFT_437972 (Rab5b-1)
Exosomal proteins of bladder cancer cells
EMIHUDRAFT_437972 (Rab5b-1)
GTP-binding proteins [BR:
ehx04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
EMIHUDRAFT_437972 (Rab5b-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
AAA_16
Motif
Other DBs
NCBI-GeneID:
17256159
NCBI-ProteinID:
XP_005762418
JGI:
Emihu1_437972
UniProt:
A0A0D3IFF4
R1BU11
LinkDB
All DBs
Position
Unknown
AA seq
207 aa
AA seq
DB search
MAAAAPPASGRVFQFKLVLLGDSAVGKSSLVLRFVRGQFFEYQESTIGAAFLTQTVALND
TTVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNRDTFQRGKQWVKELQRQGNPNI
VIALAGNKSDLASKRKVEPEEAESYASDNGIFFMETSAKTATNVNELFVAIARKLPKNTP
QPRPGGSGIVIAGQNGQAAAEAKKGCC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggccgccccgccggccagcggtcgcgtcttccagttcaagctcgtgctgctc
ggcgacagcgcagtcgggaagagctcgcttgtgctgcgctttgtgcgcgggcagttcttc
gagtaccaggagtccaccatcggcgctgcgtttctgacgcagacggtcgcgctcaacgac
acgaccgtcaagtttgagatttgggacacggccggccaggagcggtaccactcgctcgcg
cccatgtactaccggggcgctgctgcagcaatcgtcgtgtacgacatcacaaacagggac
acgttccagcgcgggaagcagtgggtgaaggagctgcagaggcagggcaacccaaacatc
gtgattgcgcttgcgggcaacaagtctgacttggcgtccaagcgcaaggtggagccggag
gaggcggagtcgtatgcgagcgacaacggcatcttcttcatggagacgagcgcgaagacg
gcgaccaacgtgaacgagctctttgtcgcgatcgcgcgcaagctgcccaagaacacgcca
cagccgcggccgggcggctcgggcatcgtgattgcggggcagaacgggcaggctgccgcg
gaggcgaagaaggggtgttgctga
DBGET
integrated database retrieval system