KEGG   Emiliania huxleyi: EMIHUDRAFT_439101
Entry
EMIHUDRAFT_439101 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
ehx  Emiliania huxleyi
Pathway
ehx03030  DNA replication
ehx03410  Base excision repair
ehx03420  Nucleotide excision repair
ehx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EMIHUDRAFT_439101
   03410 Base excision repair
    EMIHUDRAFT_439101
   03420 Nucleotide excision repair
    EMIHUDRAFT_439101
   03430 Mismatch repair
    EMIHUDRAFT_439101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ehx03032]
    EMIHUDRAFT_439101
   03036 Chromosome and associated proteins [BR:ehx03036]
    EMIHUDRAFT_439101
   03400 DNA repair and recombination proteins [BR:ehx03400]
    EMIHUDRAFT_439101
DNA replication proteins [BR:ehx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    EMIHUDRAFT_439101
  DNA Replication Termination Factors
   ELG1-RFC complex
    EMIHUDRAFT_439101
Chromosome and associated proteins [BR:ehx03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    EMIHUDRAFT_439101
DNA repair and recombination proteins [BR:ehx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     EMIHUDRAFT_439101
  Check point factors
   HRAD17(Rad24)-RFC complex
    EMIHUDRAFT_439101
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 nSTAND_NTPase5 AAA_16 AAA_14 Mg_chelatase AAA_22 Rad17 AAA_5 AAA_11 DNAX_ATPase_lid AAA_25 MipZ nSTAND3 Viral_helicase1 AAA_28 bpMoxR AAA_18 AAA_19 AAA_24 RuvB_N AAA_lid_RFC1 AAA_30 RNA_helicase IstB_IS21 AAA_3 NTPase_1 AAA_7 CbiA AAA_33 FtsK_SpoIIIE AAA_29 KTI12
Other DBs
NCBI-GeneID: 17250857
NCBI-ProteinID: XP_005757084
JGI: Emihu1_439101
UniProt: A0A0D3I070
LinkDB
Position
Unknown
AA seq 335 aa
MFGAPDTSSVVHEQPWLEKYRPREVKDIVGNEDTVGRIAVLAAQGNMPNLILSGPPGTGK
TTSVLALARALLGDAFKEAVLELNASDDRGIDVVRNRIKSFAQKKVTLPPGRHKIVVLDE
ADSMTEGAQQAMRRTMEIYSATTRFALACNQSDKIIEPIQSRCAILRYGKLSDQQVVTRL
TAVLQAEGAAYDEGGIEAVVFTAEGDMRQALNNAQATTAGFGIISNQNVFKVCDQPHPVV
IKRAIAACIAADFDAACSAVEELSNNGYSGMDVVGTLFKLVKFEEMDEGLKLDFIKEIGA
AHMRVLDGMDTLLQLTGLIGKLCLAAQQRKGAPRG
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgttcggcgcgccagacacctcctccgtcgtgcacgagcagccgtggctcgagaagtac
cgcccgcgcgaggtcaaggacatcgtcggcaacgaggacaccgtcggccgcatcgctgtc
cttgcggcgcagggcaacatgccgaatctgatcctgtccggcccccccgggaccggcaag
accacctctgtcctcgccctcgcccgcgcgctgctcggcgacgccttcaaagaggcggtc
ctcgagctgaacgcctccgacgaccgcggaatcgacgtcgtgcgcaaccgcatcaagagc
ttcgcgcaaaagaaggtcaccctgccgcccggccgccacaagatcgtcgtcctcgacgag
gcggactcgatgaccgagggggcgcagcaggcgatgcggaggacgatggagatctactcg
gcgaccacacggttcgcgctcgcgtgtaaccagagcgacaagatcatcgagccgatccag
tcccgctgcgccatcctgcgctacggcaagctctcggaccagcaggtggtgacgcggctg
acggcggtgctgcaggcggaaggcgcagcctacgacgagggcggcatcgaggcggtcgtc
ttcacggccgagggggacatgaggcaggcgctgaacaacgcgcaggcgaccactgcgggg
ttcggtatcatctcgaaccagaacgtcttcaaggtgtgcgaccagcctcaccccgtcgtc
atcaagcgagccatcgccgcgtgcatcgccgcggacttcgacgcggcttgctcggccgtc
gaggagctgtccaacaacgggtacagcgggatggacgtggtgggcacgctgttcaagcta
gtcaagttcgaagagatggacgaggggctcaagctcgacttcatcaaggagatcggcgcc
gcgcacatgcgcgtgctcgacgggatggacacgctgctgcagctgacaggcctcatcggc
aagctctgcctcgccgcgcagcagcggaagggcgcgccgcgcggctga

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