Emiliania huxleyi: EMIHUDRAFT_440617
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Entry
EMIHUDRAFT_440617 CDS
T02915
Name
(RefSeq) 3' exoribonuclease family, domain 1
KO
K12587
exosome complex component MTR3
Organism
ehx
Emiliania huxleyi
Pathway
ehx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMIHUDRAFT_440617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_440617
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EMIHUDRAFT_440617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
17281710
NCBI-ProteinID:
XP_005788868
JGI:
Emihu1_440617
UniProt:
A0A0D3KL04
R1FSI4
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MCVYMRRAAHKTLRLVLDEPPPVADTARCDGRGDAELRRLLVRTGVLPKASGSAYVEMGE
TKVLCAIFGPQQADGHDFLSHGRLECTVKFSAFARRTTDPAAATTDASATAALSASLSAA
LSGSVQLDQYPKSLICVHAMVLQDGGGALPALVSCGSAALAHARLKLYGLVAACGAAIPD
EGSGRVLLDPSASEERAASSRLVAATVPELSHLPLLEQEGRAQFEAVAAALRHALGGAAT
VHERMREALLAEGQTASSARKRSRGGGGAVDAAA
NT seq
827 nt
NT seq
+upstream
nt +downstream
nt
atatgtgtgtttatatgcggcgcgccgcccacaagacactccggctggtgctcgacgagc
cgccgccggtcgccgacacagcgcgctgcgacggccgcggcgacgccgagctccgccggc
tgcttgtgcgaacaggcgtgcttcccaaggcgagcggctccgcctacgtggagatgggcg
agaccaaggtgctgtgcgccatctttgggccgcagcaggccgacggccacgactttctca
gccacgggcggctcgagtgcaccgtcaagttttccgcgtttgcgcgccgcaccacggacc
cggccgccgccacgaccgacgcgagtgccactgccgctctgtcggcctcgctgtcggcgg
cgctgagcggctcggtccagctcgaccagtacccgaagagcctcatctgcgtgcacgcca
tggtgctgcaggacggcggcggcgcgctgcccgcgctcgtctcgtgcggctcggccgcgc
tggcacacgcgcggctcaagctgtacggcctggtcgccgcctgcggcgcggccattcctg
acgagggcagcggtcgagtgctgctcgacccgtccgcgagcgaggagcgcgccgccagca
gccggctggttgcggccaccgtgccggagctgtcgcatctgccgctcctcgagcaggagg
ggcgggcgcagttcgaggcggtggcggcggcgctgcggcacgcgctcggcggcgcggcga
ccgtgcacgagcgcatgcgtgaggcgctgctcgcggagggacagacggcctcctccgcac
gcaagcggagccgcggcgggggaggggcggttgacgcggcggcttga
DBGET
integrated database retrieval system
