KEGG   Emiliania huxleyi: EMIHUDRAFT_445045
Entry
EMIHUDRAFT_445045 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
ehx  Emiliania huxleyi
Pathway
ehx03030  DNA replication
ehx03410  Base excision repair
ehx03420  Nucleotide excision repair
ehx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EMIHUDRAFT_445045
   03410 Base excision repair
    EMIHUDRAFT_445045
   03420 Nucleotide excision repair
    EMIHUDRAFT_445045
   03430 Mismatch repair
    EMIHUDRAFT_445045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ehx03032]
    EMIHUDRAFT_445045
   03036 Chromosome and associated proteins [BR:ehx03036]
    EMIHUDRAFT_445045
   03400 DNA repair and recombination proteins [BR:ehx03400]
    EMIHUDRAFT_445045
DNA replication proteins [BR:ehx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    EMIHUDRAFT_445045
  DNA Replication Termination Factors
   ELG1-RFC complex
    EMIHUDRAFT_445045
Chromosome and associated proteins [BR:ehx03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    EMIHUDRAFT_445045
DNA repair and recombination proteins [BR:ehx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     EMIHUDRAFT_445045
  Check point factors
   HRAD17(Rad24)-RFC complex
    EMIHUDRAFT_445045
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA AAA_16 AAA_22 AAA_5 DUF815 AAA_2 AAA_24 TsaE T4SS-DNA_transf ABC_tran
Other DBs
NCBI-GeneID: 17264552
NCBI-ProteinID: XP_005771435
JGI: Emihu1_445045
UniProt: A0A0D3JYL9 R1E7Q2
LinkDB
Position
Unknown
AA seq 354 aa
MVLLVDKYRPRTLDGLDHGASLSASLKRLVAGGDFPHMLVYGPSGAGKKTRVMALLRELH
GPSAEKLRVESRTFKIGTHNVELTLLSSPHHIELNPSDAGNRDREVVQEVIKEIAQTAPV
VGAAADGQRAFKVVVLNEVERLSKPAQHALRRTMEKYVSTCRLLLICTNPSKVIAPIRSR
CMCLRVAAPTHDEICTVLGSVAQKEGLKLPAGLAMRIATASERNLRRAILTLEACKVAQY
PFTDNQPLQQPDWLAYIDAVALDVLHEQSPRQLLKVRGRLYELISSCIPPDLIFQQLTIA
LLKRCPKPVQHEALHHAAIYEHRLQAGQKAVFHLEAFLARFMSVYKKHMVMSQR
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggtgctgctcgtcgacaagtaccgtcccaggacgctcgatgggctggaccacggcgct
tcgctcagcgcgtcgttgaagcggctcgtcgccggcggtgactttccgcacatgctcgtc
tacggaccgtcgggcgcgggcaagaagacgcgggtgatggcgctcctgcgggagctgcac
gggccatcggcggagaagctgcgggtcgagagccgcaccttcaagatcggcacccacaat
gttgagctcacgctactctcctcgccgcatcacatcgagctgaacccgtctgatgccggc
aatcgtgaccgcgaggtggtgcaggaggtgatcaaggagattgcgcagaccgcgccggtc
gtcggcgccgccgctgacggccagcgcgccttcaaggttgtcgtgctcaacgaggtcgag
cggctgagcaagccagcgcagcacgcgctgcgccgcacgatggagaagtacgtctcgacc
tgccggctgctgctcatctgcaccaacccgtccaaggtgatcgctccgatccggtcccgc
tgcatgtgcctgcgcgtcgcggcgccgacgcacgacgagatctgcaccgtcctcggatcg
gttgcccaaaaggaggggctcaagctgcctgcggggctcgccatgcgcatcgccaccgcg
agcgagcggaacctgcggcgagcgatcctcaccctcgaggcgtgcaaggttgctcagtac
cccttcaccgacaaccagccgctgcagcagcccgactggctcgcctacattgacgcagtc
gcactcgacgtgctccacgagcagtcgccgcgccagctcctcaaggtgcgcggccggctg
tacgagctcatcagctcgtgcatcccgcccgacctcatcttccagcagctcaccatcgcc
ttgctcaagcgctgccccaagccggtccagcacgaggcgctacaccacgccgcaatctac
gagcaccggctccaggcgggccagaaggcggtcttccacctcgaggccttcctcgcccgc
ttcatgtccgtctacaagaagcacatggtgatgtcgcagcgctga

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