Emiliania huxleyi: EMIHUDRAFT_451926
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Entry
EMIHUDRAFT_451926 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03013
Nucleocytoplasmic transport
ehx03015
mRNA surveillance pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_451926
09122 Translation
03013 Nucleocytoplasmic transport
EMIHUDRAFT_451926
03015 mRNA surveillance pathway
EMIHUDRAFT_451926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_451926
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_451926
03009 Ribosome biogenesis [BR:
ehx03009
]
EMIHUDRAFT_451926
03012 Translation factors [BR:
ehx03012
]
EMIHUDRAFT_451926
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EMIHUDRAFT_451926
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EMIHUDRAFT_451926
mRNA cycle factors
Stress granule specific factors
EMIHUDRAFT_451926
Spliceosome [BR:
ehx03041
]
Complex C
Other components
EJC/TREX
EMIHUDRAFT_451926
Ribosome biogenesis [BR:
ehx03009
]
Eukaryotic type
90S particles
Helicases
EMIHUDRAFT_451926
Translation factors [BR:
ehx03012
]
Eukaryotic type
Initiation factors
eIF-4
EMIHUDRAFT_451926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_30
AAA_22
Cas3-like_C_2
nSTAND1
P-loop_SecA
SLFN-g3_helicase
TniB
Motif
Other DBs
NCBI-GeneID:
17260015
NCBI-ProteinID:
XP_005766297
JGI:
Emihu1_451926
UniProt:
A0A0D3IRI3
R1BUL9
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MTAMVDDETLDFSTSDDVQIVESFDAMGLKDELLRGIYAYGFEKPSAIQQRAIMPILKGR
DTIAQAQSGTGKTTIFSVGVLHCIDTSQRETQALALSPTRELAEQTQKVMLALGDYMSVQ
CHACIGGKSIGEDIRRLDAGVHAVSGTPGRVFDMIRRRNLRTRAIKMLVIDEADEMLSQG
FKEQIYDIYRYLPPATQVVLISATLPNEILEMTRKFMTDPVRILVKRDELTLEGIKQFFV
AVEREEWKFDTLCDLYDTLTITQAVIFCNTKKKVDWLTHKMRQANFTVSSMHGDMPQKER
DAIMAEFRSGDSRVLIATDVWGRGIDVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAIN
FVKSDDIRILRDIEQFYSTQIDEMPMNVADLI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgatggttgacgacgagacgctcgacttcagcacgtcggacgacgtgcagatc
gtcgagtccttcgatgccatggggctcaaggacgagctgctccgcggcatctacgcgtac
ggctttgagaagccgtccgccatccagcagcgcgccatcatgcccatcctcaagggccgc
gacaccatcgcgcaggcgcagtcgggcaccggcaagacgaccatcttttcggtgggcgtg
ctgcactgcatcgacacctcgcagcgcgagacgcaggcgctcgcgctctccccgacgcgc
gagctggcagagcagacgcaaaaggtgatgctcgcgctcggagactacatgtcggtgcag
tgccacgcctgcatcggaggcaagtcgatcggcgaggacatccgccgcctcgacgccgga
gtgcacgccgtctccggcacgccgggccgcgtcttcgacatgatccgccgccgcaacttg
cgcacgcgcgcaatcaagatgctcgtcatcgacgaggcggacgagatgctctcccagggc
ttcaaggagcagatctacgacatctaccgctacctgccgcccgccacccaagtcgtcctc
atctcggcgacgctgcccaacgagatcctcgagatgacgcgcaagtttatgactgacccc
gttcggattctggtcaagcgcgacgagctgacgctcgagggcatcaagcagttcttcgtc
gcggtcgagcgggaggagtggaagttcgacacgctctgcgacctgtacgacaccctcacc
atcacgcaggcggtcatcttttgcaacacgaagaagaaggtcgactggctcacccacaag
atgaggcaggcaaacttcaccgtctcctccatgcacggggacatgccgcaaaaggagcgc
gacgcaatcatggccgagttccgctcgggcgactcgcgcgtcctcatcgccacagacgtg
tggggccgcggcatcgacgtgtcgctcgtgatcaactacgacctccccaacaaccgcgag
ctctacatccaccgcatcggccgctcgggccggttcggccgcaagggcgtcgcgatcaac
ttcgtcaagagcgacgacatccgcatcctgcgcgacatcgagcagttctactcgacgcag
atcgacgagatgccgatgaacgtagcagacctgatctag
DBGET
integrated database retrieval system
