Emiliania huxleyi: EMIHUDRAFT_453147
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Entry
EMIHUDRAFT_453147 CDS
T02915
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03082
ATP-dependent chromatin remodeling
ehx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EMIHUDRAFT_453147
03083 Polycomb repressive complex
EMIHUDRAFT_453147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ehx03036
]
EMIHUDRAFT_453147
Enzymes [BR:
ehx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
EMIHUDRAFT_453147
Chromosome and associated proteins [BR:
ehx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
EMIHUDRAFT_453147
HDAC complexes
Sin3A-HDAC complex
EMIHUDRAFT_453147
BRAF-HDAC complex
EMIHUDRAFT_453147
REST complex
EMIHUDRAFT_453147
SHIP complex
EMIHUDRAFT_453147
MiDAC complex
EMIHUDRAFT_453147
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
EMIHUDRAFT_453147
Heterochromatin formation proteins
Other heterochromatin formation proteins
EMIHUDRAFT_453147
Chromatin remodeling factors
NuRD complex
EMIHUDRAFT_453147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
17254515
NCBI-ProteinID:
XP_005760857
JGI:
Emihu1_453147
UniProt:
R1BFB1
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MSRASGKQRVCYFYDSDIGNYYYGQGHPMKPHRIRMAHNLLLNYGLYKKMEIYRPSPATF
DELRKFHSDEYMRFLRHITPDNMGEYTKQMQRFNVGEDCPVFEGLYQFCQASSGGSIGGA
VKLNKGTSDIAINWAGGLHHAKKSEASGFCYANDIVLAILELLKHHRRVLYIDIDIHHGD
GVEEAFYTTDRVLTVSFHKFGEYFPGTGDVKDVGANAGKYYSVNFPLKDGIDDASYASIF
KPVIGQIMQMYQPGAIVLQCGADSLCGDRLGCFNLTIRGHAECVRFVLQQKVPTLILGGG
GYTIRNVSRCWTYESAVVLNEEISDDLPYNDYYEYYGPDYKLHYAPSGMENLNIPENLEK
IKSKVFEHLRQLQPAPNDDPDVRVSQRGGDERQEHGAEFYSGRPGE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcgcgagcggcaagcagcgggtgtgctacttctacgactctgacattggcaac
tactactatggccagggccatcccatgaagcctcatcgtattcgcatggctcacaacctg
ctgctcaactatggcctctacaagaagatggagatctaccggccgagcccagccaccttc
gatgagctgcgcaagttccactccgacgagtacatgcgtttcctgcggcacatcacgcca
gacaacatgggcgagtacaccaagcagatgcagcgattcaatgtcggcgaggactgcccc
gtcttcgagggcctctaccagttttgccaggccagctcgggcggctcgatcggcggcgcc
gtcaagctcaacaagggcacgtcggacattgcgattaactgggcgggcgggctgcaccac
gcgaaaaagtccgaggcctcgggcttctgctacgcgaacgacatcgtgcttgccatcctc
gagctgctcaagcaccaccgccgcgtgctctacattgacattgacatccaccacggcgac
ggcgtcgaggaggccttttacacgacggaccgcgtgctgaccgtctcctttcacaagttt
ggcgagtactttcccggcacgggcgacgtcaaggacgtcggagcaaacgcggggaagtac
tactcggtcaactttccgctcaaggacggcatcgacgacgcctcgtacgcctccatcttc
aagcccgtgatcgggcagatcatgcagatgtaccagcccggcgctatcgtgctgcagtgc
ggcgccgactcgctctgcggcgaccggctcggctgcttcaacttgaccatccgggggcac
gccgagtgcgtgcgctttgtgctgcagcagaaggtgcccacgctcatcctgggcggcggc
ggctacacgatccgcaacgtgtcgcgctgctggacgtacgagtctgccgtggtgctgaat
gaggagatctcggacgacctcccgtacaacgactactacgagtactatgggccggactac
aagctgcactacgcgccctcgggcatggagaacctcaacatccccgagaacctcgagaag
atcaagtccaaggtcttcgagcacttgcggcagctgcagccggcgccgaacgacgacccg
gacgtgcgggtgagccagcgggggggcgacgagcggcaggagcatggggcggagttctac
tcgggcaggccaggcgagtga
DBGET
integrated database retrieval system