KEGG   Emiliania huxleyi: EMIHUDRAFT_456588
Entry
EMIHUDRAFT_456588 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
ehx  Emiliania huxleyi
Pathway
ehx03020  RNA polymerase
ehx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EMIHUDRAFT_456588
  09124 Replication and repair
   03420 Nucleotide excision repair
    EMIHUDRAFT_456588
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehx03021]
    EMIHUDRAFT_456588
   03400 DNA repair and recombination proteins [BR:ehx03400]
    EMIHUDRAFT_456588
Enzymes [BR:ehx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EMIHUDRAFT_456588
Transcription machinery [BR:ehx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     EMIHUDRAFT_456588
DNA repair and recombination proteins [BR:ehx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EMIHUDRAFT_456588
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 17275682
NCBI-ProteinID: XP_005782839
JGI: Emihu1_456588
UniProt: A0A0D3K3S5 R1EUY6
LinkDB
Position
Unknown
AA seq 949 aa
MARNNYQDFVELNVSTCGATDANCGGSPCHSYASDASLRDVQFEHSGRATYGDLARGKRK
RGSTQGVSKDKRIEYAKQILQREMLPHVGSQPCCSGVTPHSRSTIKRHGPTPLGIQPYCE
TKKAYFVGYIVHKLLILRFAPRPPLGHTCAPAAAGPLLGQLFRQLFRKLSKDVQKYGQKC
IDKGQDFSPVAAVQHKTISNGLKYALATGTHLASRRAGRAHGSALTLGSTTEIGNWGQQK
SAPGSIRAGVLNRLTFASTLSHLRRLNTPIGREGKLAKPRQLHNTHWGMVCPAETPEGQA
VGLVKNLSLMAYISVGSAPEPILEFLEEWATENLEEIQPSAIPAATKVFVNGAWVGIHHQ
PDQLVKTLRAMRRGVDISAEVSIVRDIQARELRLFSDAGRCCRPILIVEDQSLLLKKEHI
DKLRDKEVSRFNWSDCIANGLIEYIDTEEEETVMIAMNLSDLRADNRMYRYTHCEIHPSM
ILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNYQLRMDTMANVLYYPQKPLGITR
SMSYLHFRELPAGINATVAIMCYSGYNQEDSVIFSQSSIDRGFFRSVFYRCYRDEERKVY
FSGDRGGPESGRSEKFERPSRETDGLVPPGVRVSGDDIIIGKTAPVEPRAEELQDAGAAR
YEKRDASTPLRSSEAGYVDQVLLTTNQEGRKFVKVRIRSVRVPQIGDKFASRHGQKGTIG
ITYRQEDMPFNCEGITPDIIVNPHAIPSRMTIGHLVECLLSKVSSLTGDEGDATPFASVT
VDDISKLLQNFGYQKRGFEVMYNGHTGRRLERLESSIFLGPTYYQRLKHMVDDKIHSRAR
GPVTLLTRQPMEGRARDGGLRFGEMERDCMISHGVASIMKERLFECSDRFRVHVCDICGM
VAIANLNKGTFECRGCRNKTRISQVFMPYACKLLFQELMAMQIAPRMMV
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggcccgaaacaactaccaagactttgtcgagctcaacgtctctacctgtggcgcgacc
gacgcaaactgcggaggatcgccctgccacagctacgcgagcgacgccagcttgcgagac
gttcaattcgagcattcgggccgcgcgacctatggagacctagccagaggcaagcgcaag
cgcggctcgacccagggggtgagcaaggacaagcgcatcgagtacgccaagcagatcctg
cagcgagagatgcttccgcacgtgggcagccagccgtgctgctccggagtcactccccac
tcacggtccaccatcaagaggcatggtccaactcccctaggcatccagccgtactgcgag
accaagaaggcctacttcgtcgggtacatcgtccacaagctcctcatcctgcgcttcgcc
cctcggccgcccctcggccacacgtgcgcacctgctgctgcaggcccgctcctcggccag
ctcttccggcagctcttccgcaagctctccaaggacgtgcaaaagtacggccaaaagtgc
atcgacaagggccaggacttctcgcccgtcgccgccgtgcagcacaagaccatctccaac
ggactcaagtacgccctcgccacgggcacacacctcgccagcagaagggcgggccgtgcc
cacgggtcagctctcaccctcggctccaccactgagataggcaactggggccagcagaag
agcgcgccgggctcgatccgcgccggcgtcctcaaccggctcaccttcgcctcgaccctc
tcgcacctccggcggctcaacacgccgatcgggagagagggcaagcttgccaagccgcgc
cagctgcacaacacgcactggggcatggtttgccctgcggagacgcccgaagggcaggcc
gtcgggctggtcaagaacctctctctgatggcctacatctcggtcggctccgcgcccgag
cccatcctcgagttcctcgaggagtgggcgaccgagaacctcgaggagatccaaccctcc
gccatccccgccgccacaaaggtcttcgtcaacggcgcctgggtcggcatccaccaccag
cccgatcagctcgtcaagacgctgcgcgcgatgcggcgcggcgtcgacatctcggccgag
gtgtccatcgtgcgcgacatccaggcgcgcgagctgcgcctcttctcggacgcgggccgg
tgctgccgcccgatcctgatcgtcgaggaccagtcgctgctgctcaagaaggagcacatc
gacaagctgcgcgacaaggaggtgtcgcgcttcaactggtccgactgcatcgccaacggg
ctcatcgagtacatcgacaccgaggaggaggagacggtgatgatcgcgatgaacctctcc
gacctgcgcgccgacaaccggatgtaccgctacacgcactgcgagatccacccctcgatg
atcctcggcatctgcgcgtcgatcatccccttcccggaccacaaccagtcgccgcgcaac
acgtaccagtccgccatgggcaagcaggccatgggcgtgtacatcaccaactaccagctg
cggatggacacgatggccaacgtgctctactacccgcaaaagccgctcggcatcactcgc
tcgatgtcgtacctccacttccgcgagctgcccgccggcatcaacgcgacggtggcgatc
atgtgctactcgggctacaaccaggaggactcggtcatcttctcgcagtcctcgatcgac
cgcggcttcttccgctccgtcttttaccgctgctaccgcgacgaggagcgcaaggtctac
ttctcgggcgaccgcggcgggccagagagcggccgctccgaaaagttcgagcggccgtcg
cgcgagacggacgggctcgtgccgcccggcgtgcgcgtgtcgggagacgacatcatcatc
ggcaagacggcgcccgtcgagccgcgcgccgaggagctgcaggacgccggcgcggcgcgc
tacgagaagcgagacgcctcgacgccgctccggtcgtcggaggctggctacgtcgaccag
gtgctgctcacgaccaaccaggaggggcgaaagttcgtcaaggtgcggatccgctcggtg
cgggtgcctcagatcggcgacaagttcgcgtcgcgccacggccaaaaggggacgatcggc
atcacctaccggcaggaggacatgcccttcaactgcgagggcatcacgcccgacatcatc
gtcaacccgcacgcgatcccctcccgcatgaccatcggccacttggtcgagtgcctcctc
tccaaggtctcttctctcaccggcgacgagggcgacgcgacgcccttcgcctcggtcacc
gtcgacgacatctccaagctgctgcagaacttcggctaccagaagcgcggcttcgaggtg
atgtacaacggccacaccggcaggcggctcgagcggctcgagtcgtccatcttcctgggc
ccgacctactaccagcggctcaagcacatggtggacgacaagatccactcgcgcgcgcgc
gggccggtgacgctgctcacccgccagccgatggagggccgcgcgcgcgacggcgggctg
cgcttcggcgagatggagcgcgactgcatgatctcgcacggcgtcgcctccatcatgaag
gagcggctcttcgagtgctcggaccgcttccgcgtgcacgtgtgcgacatctgcggcatg
gtcgccatcgccaacctcaacaaggggaccttcgagtgccgcggctgccgcaacaagacg
cgcatctcgcaggtcttcatgccgtacgcgtgcaagctcctcttccaggagctgatggcg
atgcagatcgccccgcgcatgatggtctga

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