Emiliania huxleyi: EMIHUDRAFT_456588
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Entry
EMIHUDRAFT_456588 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03020
RNA polymerase
ehx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EMIHUDRAFT_456588
09124 Replication and repair
03420 Nucleotide excision repair
EMIHUDRAFT_456588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_456588
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_456588
Enzymes [BR:
ehx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EMIHUDRAFT_456588
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
EMIHUDRAFT_456588
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
EMIHUDRAFT_456588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
17275682
NCBI-ProteinID:
XP_005782839
JGI:
Emihu1_456588
UniProt:
A0A0D3K3S5
R1EUY6
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MARNNYQDFVELNVSTCGATDANCGGSPCHSYASDASLRDVQFEHSGRATYGDLARGKRK
RGSTQGVSKDKRIEYAKQILQREMLPHVGSQPCCSGVTPHSRSTIKRHGPTPLGIQPYCE
TKKAYFVGYIVHKLLILRFAPRPPLGHTCAPAAAGPLLGQLFRQLFRKLSKDVQKYGQKC
IDKGQDFSPVAAVQHKTISNGLKYALATGTHLASRRAGRAHGSALTLGSTTEIGNWGQQK
SAPGSIRAGVLNRLTFASTLSHLRRLNTPIGREGKLAKPRQLHNTHWGMVCPAETPEGQA
VGLVKNLSLMAYISVGSAPEPILEFLEEWATENLEEIQPSAIPAATKVFVNGAWVGIHHQ
PDQLVKTLRAMRRGVDISAEVSIVRDIQARELRLFSDAGRCCRPILIVEDQSLLLKKEHI
DKLRDKEVSRFNWSDCIANGLIEYIDTEEEETVMIAMNLSDLRADNRMYRYTHCEIHPSM
ILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNYQLRMDTMANVLYYPQKPLGITR
SMSYLHFRELPAGINATVAIMCYSGYNQEDSVIFSQSSIDRGFFRSVFYRCYRDEERKVY
FSGDRGGPESGRSEKFERPSRETDGLVPPGVRVSGDDIIIGKTAPVEPRAEELQDAGAAR
YEKRDASTPLRSSEAGYVDQVLLTTNQEGRKFVKVRIRSVRVPQIGDKFASRHGQKGTIG
ITYRQEDMPFNCEGITPDIIVNPHAIPSRMTIGHLVECLLSKVSSLTGDEGDATPFASVT
VDDISKLLQNFGYQKRGFEVMYNGHTGRRLERLESSIFLGPTYYQRLKHMVDDKIHSRAR
GPVTLLTRQPMEGRARDGGLRFGEMERDCMISHGVASIMKERLFECSDRFRVHVCDICGM
VAIANLNKGTFECRGCRNKTRISQVFMPYACKLLFQELMAMQIAPRMMV
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaacaactaccaagactttgtcgagctcaacgtctctacctgtggcgcgacc
gacgcaaactgcggaggatcgccctgccacagctacgcgagcgacgccagcttgcgagac
gttcaattcgagcattcgggccgcgcgacctatggagacctagccagaggcaagcgcaag
cgcggctcgacccagggggtgagcaaggacaagcgcatcgagtacgccaagcagatcctg
cagcgagagatgcttccgcacgtgggcagccagccgtgctgctccggagtcactccccac
tcacggtccaccatcaagaggcatggtccaactcccctaggcatccagccgtactgcgag
accaagaaggcctacttcgtcgggtacatcgtccacaagctcctcatcctgcgcttcgcc
cctcggccgcccctcggccacacgtgcgcacctgctgctgcaggcccgctcctcggccag
ctcttccggcagctcttccgcaagctctccaaggacgtgcaaaagtacggccaaaagtgc
atcgacaagggccaggacttctcgcccgtcgccgccgtgcagcacaagaccatctccaac
ggactcaagtacgccctcgccacgggcacacacctcgccagcagaagggcgggccgtgcc
cacgggtcagctctcaccctcggctccaccactgagataggcaactggggccagcagaag
agcgcgccgggctcgatccgcgccggcgtcctcaaccggctcaccttcgcctcgaccctc
tcgcacctccggcggctcaacacgccgatcgggagagagggcaagcttgccaagccgcgc
cagctgcacaacacgcactggggcatggtttgccctgcggagacgcccgaagggcaggcc
gtcgggctggtcaagaacctctctctgatggcctacatctcggtcggctccgcgcccgag
cccatcctcgagttcctcgaggagtgggcgaccgagaacctcgaggagatccaaccctcc
gccatccccgccgccacaaaggtcttcgtcaacggcgcctgggtcggcatccaccaccag
cccgatcagctcgtcaagacgctgcgcgcgatgcggcgcggcgtcgacatctcggccgag
gtgtccatcgtgcgcgacatccaggcgcgcgagctgcgcctcttctcggacgcgggccgg
tgctgccgcccgatcctgatcgtcgaggaccagtcgctgctgctcaagaaggagcacatc
gacaagctgcgcgacaaggaggtgtcgcgcttcaactggtccgactgcatcgccaacggg
ctcatcgagtacatcgacaccgaggaggaggagacggtgatgatcgcgatgaacctctcc
gacctgcgcgccgacaaccggatgtaccgctacacgcactgcgagatccacccctcgatg
atcctcggcatctgcgcgtcgatcatccccttcccggaccacaaccagtcgccgcgcaac
acgtaccagtccgccatgggcaagcaggccatgggcgtgtacatcaccaactaccagctg
cggatggacacgatggccaacgtgctctactacccgcaaaagccgctcggcatcactcgc
tcgatgtcgtacctccacttccgcgagctgcccgccggcatcaacgcgacggtggcgatc
atgtgctactcgggctacaaccaggaggactcggtcatcttctcgcagtcctcgatcgac
cgcggcttcttccgctccgtcttttaccgctgctaccgcgacgaggagcgcaaggtctac
ttctcgggcgaccgcggcgggccagagagcggccgctccgaaaagttcgagcggccgtcg
cgcgagacggacgggctcgtgccgcccggcgtgcgcgtgtcgggagacgacatcatcatc
ggcaagacggcgcccgtcgagccgcgcgccgaggagctgcaggacgccggcgcggcgcgc
tacgagaagcgagacgcctcgacgccgctccggtcgtcggaggctggctacgtcgaccag
gtgctgctcacgaccaaccaggaggggcgaaagttcgtcaaggtgcggatccgctcggtg
cgggtgcctcagatcggcgacaagttcgcgtcgcgccacggccaaaaggggacgatcggc
atcacctaccggcaggaggacatgcccttcaactgcgagggcatcacgcccgacatcatc
gtcaacccgcacgcgatcccctcccgcatgaccatcggccacttggtcgagtgcctcctc
tccaaggtctcttctctcaccggcgacgagggcgacgcgacgcccttcgcctcggtcacc
gtcgacgacatctccaagctgctgcagaacttcggctaccagaagcgcggcttcgaggtg
atgtacaacggccacaccggcaggcggctcgagcggctcgagtcgtccatcttcctgggc
ccgacctactaccagcggctcaagcacatggtggacgacaagatccactcgcgcgcgcgc
gggccggtgacgctgctcacccgccagccgatggagggccgcgcgcgcgacggcgggctg
cgcttcggcgagatggagcgcgactgcatgatctcgcacggcgtcgcctccatcatgaag
gagcggctcttcgagtgctcggaccgcttccgcgtgcacgtgtgcgacatctgcggcatg
gtcgccatcgccaacctcaacaaggggaccttcgagtgccgcggctgccgcaacaagacg
cgcatctcgcaggtcttcatgccgtacgcgtgcaagctcctcttccaggagctgatggcg
atgcagatcgccccgcgcatgatggtctga
DBGET
integrated database retrieval system