Emiliania huxleyi: EMIHUDRAFT_457186
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Entry
EMIHUDRAFT_457186 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
ehx
Emiliania huxleyi
Pathway
ehx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EMIHUDRAFT_457186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ehx03009
]
EMIHUDRAFT_457186
Ribosome biogenesis [BR:
ehx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
EMIHUDRAFT_457186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR3_2nd
Beta-prop_EML
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Tricorn_N
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
17272952
NCBI-ProteinID:
XP_005779836
JGI:
Emihu1_457186
UniProt:
A0A0D3JV72
R1CXH8
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MPAKRARGASRQPAATASSTSAAAKGAATSSVLVHRCRFVDQVPDPVESLQYDPSCSRLA
VLRANSDIELWSLSEGGWFREAYVPGVPDTPVRRLALGSRTASHPDGRLFSCGLHGVVTE
WDLARLSPLDNYDSLGGAAWSLALHAGSARLAAGCEDGGVTVFGVVEEGLENVYRLPARG
GRVLSLAFSSSGGQLVAGGADGSVRLWALGGGGAARHTWRHSCQFVLESEGRKRPPLVWD
VLLLPDSLVVTADSSGRVCFYDGRRGAVDGHGTLVNRFRSHEADADVLALAATGDGSHVF
ASGVDHKALPLDAATDAPPCIHTLRPPLDEFAGAGADTGDAVADGTLAAAVLRIVFNQAA
PLSLLLCAQTWSLRVDLNADAHPSLRRLLTKYGPMRLFDFVAPGCAVVVEQPWLRVMERF
PNAMVRHQFGT
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgaagcgagcccgcggcgcctcgcggcagcccgctgcgacggcgtcgtcgacc
tcggccgcggcgaagggcgccgcgacctcgtcggtgctcgtgcaccgctgccgtttcgtt
gaccaggtgcccgatccggtcgagtccctccagtacgacccctcgtgctcgcgcctcgcg
gtgctgcgcgccaactcggacatcgagctgtggtcgctcagcgagggcggctggttccga
gaggcgtacgtgccgggcgttcccgacacgcccgtccgccggctcgccctcgggagccga
accgcgtcgcacccggacggccgcctcttctcgtgcgggctgcacggcgtcgtcacggag
tgggacctcgcgcgtctctcgccgctcgacaactacgactcgctcggcggcgccgcctgg
tcgctcgcgctgcacgccggctctgcgcggcttgcggcgggctgcgaggacggcggcgtc
acggtgtttggggtggtggaggaggggctcgagaacgtgtaccggctgcctgcgcgtggc
gggcgggtcctctccctcgccttctcctcctcgggcggccagctcgtcgccggaggagcg
gacggctcggtccggctgtgggcgctcggcggcggcggcgccgcgagacacacctggaga
cacagctgccagtttgtgctggagtcggaggggcggaagcggcctcctctggtgtgggac
gtgctgctgctgcccgactcgctcgtggtgaccgccgactcgtcgggccgcgtctgcttc
tacgacggccggcgcggggcggtagatgggcacggcaccctcgtcaaccgcttccgctcg
cacgaggccgacgccgacgtgctcgccctcgccgccactggagacgggtcgcacgtcttt
gcgtccggcgtcgaccacaaggcgctgcccctcgacgccgctaccgacgccccgccctgc
atccacaccttgcgccctccgctcgacgagttcgccggcgccggcgcggacaccggcgac
gcggttgccgacggcaccctggcggcggcggtcctccgtatcgtctttaaccaagcggct
cccctctcgctgctgctctgcgcgcagacgtggtcgctgcgcgtcgacctcaacgccgac
gcccacccaagtcttcgccggctgctcacaaagtacggcccgatgcgcctctttgacttt
gtggcgccgggctgcgccgtcgtcgtcgagcagccgtggctgcgcgtgatggagcgcttc
ccgaatgcgatggtccgccaccagtttgggacgtga
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