Emiliania huxleyi: EMIHUDRAFT_457471
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Entry
EMIHUDRAFT_457471 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_457471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_457471
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EMIHUDRAFT_457471
Spliceosome [BR:
ehx03041
]
Complex C
Other components
Step II factors
EMIHUDRAFT_457471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
HA2_N
DEAD
DUF3323
Motif
Other DBs
NCBI-GeneID:
17271466
NCBI-ProteinID:
XP_005778350
JGI:
Emihu1_457471
UniProt:
A0A0D3JQY6
R1ESI7
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MTPSALSSAQVGCELGQEVGYSIRFEDVTSEATVLKYMTDGVLLRESLTEPDLDKYSAII
MDEAHERGLNTDTVARRRDLKLIVTSATMDANKFSEFFGSVPVFKIPGRTFPVDILYAKV
PQEDYLEAAIKQAIQIHLSQPKGDILIFMTGQEDILATCEGISERLIECGEGVPPILVLP
VYSLLPSELQAKIFDPAPDGARKVIVATNIAETSLTVDGIYYVIDSGFCKLKVYNSRMGM
DSLTVYPTSQAGCNQRSGRAGRTGPGRCYRLYTEYAYSHELLVQTVPEIQRTNLGNVVLL
LKSLGIDNLLTFDFMDPPPQDNLLNSMYHLWFLGALANTGELTPMGRRMVEFPLDPTLAK
MLLFSEDLGCVDDVATVVSCLSMPTIFYRPKEREAESDAAREKFFAPESDHLTLHNVYLQ
WRRNNYRSDWCNKHFIHAKAMRKVKEVREQILDICKQLKMRVTACGSDVDQRFGV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtccgcgctgtcttccgctcaggtcggctgcgagctcgggcaggaggtcggc
tactcgatccggttcgaggacgtgacctcagaggcgacggtcctcaagtacatgacggac
ggcgtgctgctgcgcgagtcgctcacagagcccgacctcgacaagtactcggccatcatc
atggacgaggcgcatgagcgcgggctcaacacggacacggtcgcgcgccgccgcgatctc
aagctcatcgtcacgtcggcgacgatggacgccaacaaattctccgagttctttggctcc
gtgcccgtcttcaagatcccaggccgcaccttcccggtcgacattctgtacgccaaagtg
ccgcaggaggactacctcgaggcggccatcaagcaagcgatccagatccacctctcgcag
cccaagggcgacatcctcatctttatgacggggcaggaggacatcctcgccacctgcgag
ggcatcagcgagcggttgatcgagtgcggggaaggagtgccgcccatcctggtgctgccc
gtctactcgctcctcccgtcggagctgcaggcaaagatcttcgacccggcgcccgacggc
gcccgcaaggtcatcgtggcgacaaacatcgccgagacatccctcaccgtcgacggcatc
tactacgtcatcgactccggcttctgcaagctcaaggtgtacaactcgcgcatgggcatg
gactcgctgacggtgtacccgacctcacaggccggctgcaatcagcgctccggccgcgcc
ggccgcaccggtcccggccggtgctaccggctgtacaccgagtacgcgtactcgcacgag
cttctcgtgcagacggtgcccgagatccagaggaccaaccttggcaacgtggtgctgctg
ctcaagtcgctcgggatcgacaacctgctcaccttcgacttcatggacccgccgccgcag
gacaacctcctcaactcgatgtaccacctttggttcctcggcgcgctcgccaacaccggc
gagctcacgccgatgggccgcaggatggttgagttcccgctcgaccccactctcgcaaag
atgctcctcttctcggaagacctcggctgcgtcgacgacgtcgcgaccgtcgtctcgtgc
ctctcgatgcccaccatcttctaccggcccaaggagcgcgaggcggagagcgacgcagcg
cgcgaaaagttctttgcgcccgagagcgaccacctaacgctgcacaacgtgtacctgcag
tggcggcggaacaactaccgctccgactggtgcaacaagcacttcatccacgccaaggcg
atgcgcaaggtcaaagaggttcgcgagcagatcctcgacatctgcaagcagctcaagatg
cgcgtcaccgcctgcggctccgacgtcgaccagcgtttcggcgtctag
DBGET
integrated database retrieval system
