Emiliania huxleyi: EMIHUDRAFT_457982
Help
Entry
EMIHUDRAFT_457982 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMIHUDRAFT_457982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_457982
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_457982
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EMIHUDRAFT_457982
Messenger RNA biogenesis [BR:
ehx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EMIHUDRAFT_457982
DNA repair and recombination proteins [BR:
ehx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EMIHUDRAFT_457982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
AAA_22
Motif
Other DBs
NCBI-GeneID:
17269057
NCBI-ProteinID:
XP_005775940
JGI:
Emihu1_457982
UniProt:
A0A0D3JJ26
R1EKP5
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MTDTAHESLLMRDPPPRPHPGDWEARASALLREHWGHSVLRASQRLAIRCALEARDCLVV
APTGGGKSVCFQLLPLLTGRPVVIVTPLVALMHDQVAAASARGMRAVYLGSSQTDASSEA
RASRGEFDLVYVTPEKLATPAGRDLVAALHSARPICAIAIDEAHCVLSWGLDFRPAFLRL
GEARPAGVPLMALTATAPPPTRRELAASLQMGTDTSVVVAPLDRPNLHYSVAQKGDSGAA
SLLPLLRRHEGAALVYVPTTAEADELAAALSEAGVQAAPYHARAAGRHESLRSWSRDGAR
VLVATVALGLGVDKPDVRLVVHWGPPASPELYAQQAGRAGRDGLPAACVLLHAPSDWSRL
RGLSAAEGEPRHAEAAAAMRSLAHCSGCRRAALLRYLGDTLPPRAAAPEAPSSPSARPEP
APCCDNCSRGQGCLERCHDVASEARALLLAAEACGGRFGLPTVLEAGGRLLLCSAFGAGV
RCGRSAVWWRVLAEAMELVALPAAPGAHPFAPRSYHALRVASAGRALLAKGARPLLRSLR
GSVAAAPSDADGGEESEEPLGALVSERCLVALAKARPSDMEGLAVVAGAEAPRLRGVDGS
GAAVLALLASGSSRLQLKLDSFSEEQHAVRLARRLREARARRALRDDVPPYAVVGDAQLG
LIARLRPANEQELLALAGMPRTTGGKCCRVEEQAASATLVWGEGQALSERILYMEQDVDI
AHSQPTAPPRRWAPPSVSEGAQLHRLVMRNVITRRAAILAESADIFAIWELLRLHRYFGR
IGAPTVAEVL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaccgctcacgagtcgctgctcatgcgcgaccctcctccgcgaccgcatccg
ggcgattgggaggcccgtgcgtctgcgctgctccgcgagcactggggccacagtgtgctc
cgcgcgtcgcagcgcctcgccatccgctgcgcgctcgaggcgcgcgactgcctcgtggtg
gcgccgaccggcggcggcaagagcgtttgcttccagcttctcccgttgctgactggccgc
cccgtagtcatcgtgacgccgctcgtcgcactcatgcatgaccaggtcgctgcggcgagc
gcgcgagggatgcgggccgtctacctcggctcctcgcagaccgacgcctcgtccgaggcg
agggcctcccgcggcgagttcgacttggtctatgtgacgcccgagaagctcgcgacgccg
gccggccgcgacctcgtcgcggctctccactccgcgcgccccatctgcgcgatcgccatc
gacgaggcgcactgcgtcctctcgtgggggctcgactttcggcccgccttcctgcgcttg
ggcgaggcgaggccggcgggcgtgcctctgatggcgctcacggcgacggcgccgccgccc
acgcggcgcgagctggcggcgagcctgcagatggggaccgacacgtcggtcgtggttgcg
ccgctcgaccgcccgaacctgcactacagcgtggcccagaagggcgacagcggggccgcc
tcgctgctgccgctgctccggcggcacgagggcgccgcgctcgtctacgtcccgaccacc
gccgaggcggacgagctcgccgccgcgctgagcgaggcgggcgtgcaggccgcgccctac
cacgcgcgcgctgccggccggcacgagtcgctgcgttcgtggtcgcgcgacggcgcgagg
gttctcgtggcgacggtggccctcggcctcggcgtcgacaagccggacgtccgcttggtc
gtgcactggggccctcccgcgtcgcccgagctgtacgcgcagcaggcgggccgcgccggc
agagacggcctccccgcggcgtgcgtcctcctccacgccccttcggactggtcgcgcctg
cgcgggctctccgccgcggagggcgagccgcgccacgccgaggccgccgcagccatgcgc
tcgcttgcccactgctccgggtgccggcgagccgcgctgctgaggtacctcggggacacg
ctccctccgcgggcggccgctcccgaggcgccctcctccccctctgctcgccccgagcca
gccccctgctgcgacaactgctcccgcggccagggctgcctcgagcggtgccacgacgtg
gcgagcgaggcgcgcgcgctcctgctggcggccgaggcgtgcgggggccgcttcggcctc
cccaccgtgctcgaggcgggcggccgcttgctgctctgctccgcctttggcgccggcgtg
cgttgcggcaggtccgccgtgtggtggcgagtgctggccgaggcgatggagctcgtcgct
ctgccggcggctcccggcgcccacccattcgcgccccgctcctaccacgcgcttcgcgtc
gcgagcgctgggcgggcgctgctcgcgaaaggcgcgcggccgcttctccgctcgctgagg
gggtccgtggccgccgccccgtcggacgctgacggcggcgaggagagcgaggagccgctc
ggcgcgctggtgagcgagaggtgtctcgtcgcgctggcaaaggcgcggccgtccgacatg
gagggcctcgccgtcgtcgccggcgccgaggcgccgaggctgcgcggggtcgacggctct
ggcgcggctgtgctcgccctgctcgcctcgggcagcagtcggctgcagctcaagctggac
agcttctccgaggaacagcacgcggtgcgcttggcgaggaggctccgtgaggcgcgcgct
cggcgggcgctgcgcgacgacgttccgccatatgccgtcgtcggcgacgcgcagctcggc
ctcatcgcgcggctccgacccgccaacgagcaggagctgttggcgcttgccggcatgccg
cgcacgacgggcgggaagtgctgccgcgtcgaggaacaagcggcgtctgccaccctcgtt
tggggggaggggcaggcgttgagcgagagaatactgtatatggagcaagacgtagacatc
gcgcactcgcagcccaccgcgccaccgcgccgttgggcgccgccctcggtctccgaggga
gctcagctacaccgtctggtcatgcgcaacgtgattacgcggcgcgcggctatactcgcc
gagagcgcggatatatttgctatttgggagctattgcgattgcatcgctatttcgggcgt
atcggcgcgccgacggtcgccgaagtgttgtag
DBGET
integrated database retrieval system
