KEGG   Emiliania huxleyi: EMIHUDRAFT_458392
Entry
EMIHUDRAFT_458392 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
ehx  Emiliania huxleyi
Pathway
ehx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EMIHUDRAFT_458392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehx03021]
    EMIHUDRAFT_458392
Enzymes [BR:ehx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EMIHUDRAFT_458392
Transcription machinery [BR:ehx03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     EMIHUDRAFT_458392
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 zf-tcix
Other DBs
NCBI-GeneID: 17266882
NCBI-ProteinID: XP_005773771
JGI: Emihu1_458392
UniProt: A0A0D3JCV7 R1CFT7
LinkDB
Position
Unknown
AA seq 1353 aa
MTTIPSGEKRQVQRDENMSETKISHIQFGMFGPPEVSRLAEFDVTSDRAYEMPKPEEKVR
TPVVGGVLDRRLGVSDKASTCETCGLRMNDCPGHFAEVRLELPVFHIGYLKPVVALLQTI
CKDCARVLLPQPERTKMLRALSHPMTRGDSVRMGAAFKRVVERCKKASRVRECPYCGARN
GLVRKVGFARIVHEKIPPKENSDRAHRERDTFVSSFEHATGQPKGAFENPVLAGSDVAEL
LPKAQDDLTPLRVKALLRAIVPADLPLLDMSATHGRPEALLVERLLVPPVPIRPSVMADP
SVGSNEDDLTVKLSQIITVNNAIRCALSGGKATVAMLMEDWDYLQLQVAMYINGANVPGV
RPDWQAEKRPIRAYAQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLAIDEVGVPDRVA
RVLTYPERVHAHNLSLMRKLVVNGPNLWPGANYVETEAGKRSLKFGDRRRVAAELKVGDV
VERHLTNGDVVLFNRQPSLHKLSIMAHRARVVPRTFRFNECVCAPYNADFDGDEMNLHLP
QTEEARAEALCLMGVHANLVTPRNGEMQGMFFPRDGFTRLVAYMSDAAEPIELPPPAILK
PVELWTGKQLFTCMLRPSRASAVFANLETKNKSYNPLRQKPEPEAMCPADGWVVFQNSEH
LCGSLDKSQIGGGNKASLLSVLLRENSEIAAAQAMERLARVTSRFLADYGFSIGVQDVQP
TPRLTEAKAKLLASGYEACSGKIREFESGQLTPAPGCTAEQTLESEINGLLSRIRSSINI
SQMIACVGQQSVGGRRMPNGFIHRALPHFPRHSRAPPDKGFVANSFYTGLAPTEFFFHTM
GGREGLALEDLTVSYDGSVRNSEANLVQFHYGDDELDPAMMEDKDGRPVNFERTLLHQRA
LAFVASPAFTGVVSRTIASEPAKFEVELRAFVASKLLPSLPGAPANGVALPPPALEPTKV
GVGAKSSPRKAKYLASKVEPGTAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPR
IKEIINAAKKISTPIIKAELDKPFDLTAARVVKGRMERTELGQICESVVEVYDLVECYIS
VKLDLALIERLHLAVTVASVRTSILAAPKMKLHENDVRVRSSAEVRVHPARVSREHLALP
ELHRLRGMLLTVLVCGIKEVTRAVITQKEEGEKSEVEKASGGPCYKLLVEGAGLRDVLGV
RGVRGGATRSTHIAEVEKTLGIEAARQTIMDEIQYTMGQHGMEIDCRHVTLLADVMCFRG
EVLGITRFGVPKMKQSVLMLASFEKTTDHLFEAAVHSRTDAIRGVSECIILGIPIPLGTG
IFKLLQQVPKAVLPKSEPLLLPSTEKRLRFGAR
NT seq 4062 nt   +upstreamnt  +downstreamnt
atgacgaccataccctctggcgagaagcgccaagtgcagcgcgatgaaaacatgagcgag
accaaaatatcgcacatccagttcggcatgtttggcccgcccgaggtctcgcggctcgcc
gagtttgacgtgacgagcgaccgagcatacgagatgccaaagcccgaggagaaggtgcgg
acgccggtggtcggcggcgtgctggaccgccgcctcggcgtctcggacaaagcgtcgacg
tgcgagacgtgcggcctccgcatgaatgactgcccgggccactttgccgaggtccggctc
gagctgcccgtctttcacatcgggtacctcaagccggtggtcgcgctgctgcagaccatc
tgcaaggactgcgcgcgcgtgctgctgccgcaaccggagcgcacaaagatgctccgcgcg
ctgagccacccgatgacgcgcggcgactcggtgcggatgggagccgccttcaagcgcgtc
gtcgagcgctgcaagaaggcgtcgcgagttcgcgagtgcccgtactgcggcgcgaggaac
gggctcgtgcgcaaggtcggcttcgcgcggatcgtgcacgagaagatccccccaaaggag
aactccgaccgggcgcaccgcgagcgcgacacgtttgtctcctcgtttgagcacgccacc
ggccagccgaagggcgccttcgagaacccggtcctcgccggctcggacgtcgccgagctt
ctcccgaaggcgcaggacgacctcaccccgctccgcgtcaaggcgctgctgcgcgccatc
gtccccgccgacctgcccctcctcgacatgtctgcgacgcacggccggccggaggcgctg
ctggtcgagaggctgctcgtgccgccggtgccgatccggccgtcggtgatggccgacccg
agcgtcggctccaacgaggacgacctcaccgtcaagctctcgcagatcatcacggtcaac
aatgcgatccgctgcgcgctgagcggcggaaaggcgacggtggcgatgctgatggaggac
tgggactacctgcagctgcaggtggccatgtacatcaacggggcgaacgtgcccggcgtg
cggcccgactggcaggccgagaagcggccgatcagggcctacgcccagcggctcaagggg
aagcagggccgcttccgagggaatctgtccggcaagcgcgtcgacttttcgggccgcacc
gtcatctcccccgacccgaacctcgcgatcgacgaggtcggcgtgccggaccgcgtggcg
cgcgtgctcacctacccagagcgagtccacgcccacaacctctccctcatgcgcaagctc
gtcgtcaacgggcccaacctctggccgggcgcaaactacgtcgagaccgaggcgggcaag
cgctcgctcaagttcggcgaccggcggcgcgtcgcagcggagctcaaggtgggtgacgtg
gtcgagcggcacctcaccaacggcgacgtcgtcctcttcaaccgccagccgtcgctgcac
aagctctccatcatggcgcaccgcgcgcgcgtcgtgccgcgcaccttccgcttcaacgag
tgcgtctgcgcgccgtacaacgccgatttcgacggcgacgagatgaacctgcacttgccg
cagacggaggaggcgcgcgccgaggcgctctgcctgatgggcgtgcacgcgaacctcgtc
actccgcgcaacggcgagatgcaaggcatgttcttcccgcgcgacggcttcacgaggctg
gtcgcctacatgtcggacgcggccgagccgatcgagctgcccccgcccgcgatcctcaag
ccggtcgagctctggacgggcaagcagctcttcacctgcatgctgcgcccctcgcgcgcc
tcggccgtcttcgccaacctcgagaccaagaacaagtcgtacaacccgctccgccagaag
ccagagcccgaggccatgtgccccgccgacggctgggtcgtctttcagaactcggagcac
ctctgcggctcgctcgacaagtcgcagatcggaggcggcaacaaggcgtccctcctctcc
gtgctgctgcgcgaaaactccgagatcgcggcggcgcaggcgatggagcggctcgcgcgc
gtcacgtcgcgcttcttggccgactacggcttctcgatcggcgtgcaggacgtgcagccg
acgccgcgccttaccgaggccaaggcgaagctgctcgcctcggggtacgaggcttgcagc
ggcaagatccgcgagttcgagtcggggcagctcacgcccgcgccgggctgcaccgcggag
cagacgctcgagagcgagatcaacggcctcctctcgcgcatccgctcgtcgatcaacatc
tcgcagatgatcgcctgcgtcggccagcagtccgtcggcggccgccgcatgcccaacggc
ttcatccaccgcgcgctgccgcacttcccgcgccactcgcgcgccccgcccgacaagggc
ttcgtcgcaaactcattctacaccggcctcgcgccgaccgagttcttcttccacacgatg
ggaggccgcgaggggctggccctcgaggacctgacggtgagctacgacggctcggtccgc
aactcggaggccaacctcgtccagttccactacggcgacgacgagctcgacccggcgatg
atggaggacaaggatggccgtccagtcaacttcgagcggacgctcctccaccagcgcgct
ctcgccttcgtcgcctcgcccgccttcaccggcgtggtctcgcggaccattgcctccgag
ccggccaagttcgaggtcgagctgcgcgccttcgtcgcgagcaagctcctgccgtcgctg
ccaggcgcaccggctaacggagtcgccctcccgcctccggccctcgagccgaccaaggtg
ggcgtcggcgcaaagagctcgccgcgcaaggccaagtacctcgcgagcaaggtggagccc
ggcaccgccgtcggagcggtcggcgcgcagtcgatcggcgagccgggcacgcagatgacg
ctcaagacgttccactttgcgggcgtcgcctcgatgaacatcacactcggcgtgccgcgc
atcaaggagatcatcaacgccgccaagaagatctcgacgccgatcatcaaggccgagctc
gacaagccgttcgacctgaccgccgcgcgcgtggtcaaggggcggatggagcggaccgag
ctcggccagatctgcgagtccgtcgtcgaggtgtacgacctggtggagtgctacatctcg
gtcaagctcgacctcgccctcatcgagcggctccacctcgccgtcaccgtcgcctccgtc
cgcacctccatcctcgccgcgccgaagatgaagctgcacgagaatgacgtgcgcgtgcgc
tcctcggcggaggtgcgcgtgcacccggcgcgcgtcagccgcgagcacctcgccctcccc
gagctgcaccggctgcgcgggatgctgctgacagtgctggtgtgcggcatcaaggaggtg
acgcgcgccgtcatcacgcagaaggaggagggcgagaagagcgaggtggagaaggcgagc
ggcggcccctgctacaagctgctcgtcgagggcgccgggctgagggacgtcctcggcgtg
cgcggcgtgcgcggcggcgcgacgcgatcgacgcacatcgccgaggtcgagaagacgctc
ggcatcgaggcggcgcggcagaccatcatggacgagatccagtacacgatggggcagcac
gggatggagatcgactgccggcacgtcacgctgctcgccgatgtcatgtgcttccgcgga
gaggtgctcggcatcacgcgcttcggcgtgccgaagatgaagcagtcggtgctcatgctc
gcctccttcgagaagacgacggaccacctcttcgaggcggcggtccactcgcgcaccgac
gccatccgcggcgtctccgagtgtatcatcctcggcatcccgatcccgctcggcaccggc
atcttcaagctgctgcagcaggtgccgaaggccgtcctcccaaagtcggagcccctgctg
ctgccctcgacagagaaaaggttgaggttcggcgctcgatag

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