Emiliania huxleyi: EMIHUDRAFT_458392
Help
Entry
EMIHUDRAFT_458392 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EMIHUDRAFT_458392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_458392
Enzymes [BR:
ehx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EMIHUDRAFT_458392
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
EMIHUDRAFT_458392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
zf-tcix
Motif
Other DBs
NCBI-GeneID:
17266882
NCBI-ProteinID:
XP_005773771
JGI:
Emihu1_458392
UniProt:
A0A0D3JCV7
R1CFT7
LinkDB
All DBs
Position
Unknown
AA seq
1353 aa
AA seq
DB search
MTTIPSGEKRQVQRDENMSETKISHIQFGMFGPPEVSRLAEFDVTSDRAYEMPKPEEKVR
TPVVGGVLDRRLGVSDKASTCETCGLRMNDCPGHFAEVRLELPVFHIGYLKPVVALLQTI
CKDCARVLLPQPERTKMLRALSHPMTRGDSVRMGAAFKRVVERCKKASRVRECPYCGARN
GLVRKVGFARIVHEKIPPKENSDRAHRERDTFVSSFEHATGQPKGAFENPVLAGSDVAEL
LPKAQDDLTPLRVKALLRAIVPADLPLLDMSATHGRPEALLVERLLVPPVPIRPSVMADP
SVGSNEDDLTVKLSQIITVNNAIRCALSGGKATVAMLMEDWDYLQLQVAMYINGANVPGV
RPDWQAEKRPIRAYAQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLAIDEVGVPDRVA
RVLTYPERVHAHNLSLMRKLVVNGPNLWPGANYVETEAGKRSLKFGDRRRVAAELKVGDV
VERHLTNGDVVLFNRQPSLHKLSIMAHRARVVPRTFRFNECVCAPYNADFDGDEMNLHLP
QTEEARAEALCLMGVHANLVTPRNGEMQGMFFPRDGFTRLVAYMSDAAEPIELPPPAILK
PVELWTGKQLFTCMLRPSRASAVFANLETKNKSYNPLRQKPEPEAMCPADGWVVFQNSEH
LCGSLDKSQIGGGNKASLLSVLLRENSEIAAAQAMERLARVTSRFLADYGFSIGVQDVQP
TPRLTEAKAKLLASGYEACSGKIREFESGQLTPAPGCTAEQTLESEINGLLSRIRSSINI
SQMIACVGQQSVGGRRMPNGFIHRALPHFPRHSRAPPDKGFVANSFYTGLAPTEFFFHTM
GGREGLALEDLTVSYDGSVRNSEANLVQFHYGDDELDPAMMEDKDGRPVNFERTLLHQRA
LAFVASPAFTGVVSRTIASEPAKFEVELRAFVASKLLPSLPGAPANGVALPPPALEPTKV
GVGAKSSPRKAKYLASKVEPGTAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPR
IKEIINAAKKISTPIIKAELDKPFDLTAARVVKGRMERTELGQICESVVEVYDLVECYIS
VKLDLALIERLHLAVTVASVRTSILAAPKMKLHENDVRVRSSAEVRVHPARVSREHLALP
ELHRLRGMLLTVLVCGIKEVTRAVITQKEEGEKSEVEKASGGPCYKLLVEGAGLRDVLGV
RGVRGGATRSTHIAEVEKTLGIEAARQTIMDEIQYTMGQHGMEIDCRHVTLLADVMCFRG
EVLGITRFGVPKMKQSVLMLASFEKTTDHLFEAAVHSRTDAIRGVSECIILGIPIPLGTG
IFKLLQQVPKAVLPKSEPLLLPSTEKRLRFGAR
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccataccctctggcgagaagcgccaagtgcagcgcgatgaaaacatgagcgag
accaaaatatcgcacatccagttcggcatgtttggcccgcccgaggtctcgcggctcgcc
gagtttgacgtgacgagcgaccgagcatacgagatgccaaagcccgaggagaaggtgcgg
acgccggtggtcggcggcgtgctggaccgccgcctcggcgtctcggacaaagcgtcgacg
tgcgagacgtgcggcctccgcatgaatgactgcccgggccactttgccgaggtccggctc
gagctgcccgtctttcacatcgggtacctcaagccggtggtcgcgctgctgcagaccatc
tgcaaggactgcgcgcgcgtgctgctgccgcaaccggagcgcacaaagatgctccgcgcg
ctgagccacccgatgacgcgcggcgactcggtgcggatgggagccgccttcaagcgcgtc
gtcgagcgctgcaagaaggcgtcgcgagttcgcgagtgcccgtactgcggcgcgaggaac
gggctcgtgcgcaaggtcggcttcgcgcggatcgtgcacgagaagatccccccaaaggag
aactccgaccgggcgcaccgcgagcgcgacacgtttgtctcctcgtttgagcacgccacc
ggccagccgaagggcgccttcgagaacccggtcctcgccggctcggacgtcgccgagctt
ctcccgaaggcgcaggacgacctcaccccgctccgcgtcaaggcgctgctgcgcgccatc
gtccccgccgacctgcccctcctcgacatgtctgcgacgcacggccggccggaggcgctg
ctggtcgagaggctgctcgtgccgccggtgccgatccggccgtcggtgatggccgacccg
agcgtcggctccaacgaggacgacctcaccgtcaagctctcgcagatcatcacggtcaac
aatgcgatccgctgcgcgctgagcggcggaaaggcgacggtggcgatgctgatggaggac
tgggactacctgcagctgcaggtggccatgtacatcaacggggcgaacgtgcccggcgtg
cggcccgactggcaggccgagaagcggccgatcagggcctacgcccagcggctcaagggg
aagcagggccgcttccgagggaatctgtccggcaagcgcgtcgacttttcgggccgcacc
gtcatctcccccgacccgaacctcgcgatcgacgaggtcggcgtgccggaccgcgtggcg
cgcgtgctcacctacccagagcgagtccacgcccacaacctctccctcatgcgcaagctc
gtcgtcaacgggcccaacctctggccgggcgcaaactacgtcgagaccgaggcgggcaag
cgctcgctcaagttcggcgaccggcggcgcgtcgcagcggagctcaaggtgggtgacgtg
gtcgagcggcacctcaccaacggcgacgtcgtcctcttcaaccgccagccgtcgctgcac
aagctctccatcatggcgcaccgcgcgcgcgtcgtgccgcgcaccttccgcttcaacgag
tgcgtctgcgcgccgtacaacgccgatttcgacggcgacgagatgaacctgcacttgccg
cagacggaggaggcgcgcgccgaggcgctctgcctgatgggcgtgcacgcgaacctcgtc
actccgcgcaacggcgagatgcaaggcatgttcttcccgcgcgacggcttcacgaggctg
gtcgcctacatgtcggacgcggccgagccgatcgagctgcccccgcccgcgatcctcaag
ccggtcgagctctggacgggcaagcagctcttcacctgcatgctgcgcccctcgcgcgcc
tcggccgtcttcgccaacctcgagaccaagaacaagtcgtacaacccgctccgccagaag
ccagagcccgaggccatgtgccccgccgacggctgggtcgtctttcagaactcggagcac
ctctgcggctcgctcgacaagtcgcagatcggaggcggcaacaaggcgtccctcctctcc
gtgctgctgcgcgaaaactccgagatcgcggcggcgcaggcgatggagcggctcgcgcgc
gtcacgtcgcgcttcttggccgactacggcttctcgatcggcgtgcaggacgtgcagccg
acgccgcgccttaccgaggccaaggcgaagctgctcgcctcggggtacgaggcttgcagc
ggcaagatccgcgagttcgagtcggggcagctcacgcccgcgccgggctgcaccgcggag
cagacgctcgagagcgagatcaacggcctcctctcgcgcatccgctcgtcgatcaacatc
tcgcagatgatcgcctgcgtcggccagcagtccgtcggcggccgccgcatgcccaacggc
ttcatccaccgcgcgctgccgcacttcccgcgccactcgcgcgccccgcccgacaagggc
ttcgtcgcaaactcattctacaccggcctcgcgccgaccgagttcttcttccacacgatg
ggaggccgcgaggggctggccctcgaggacctgacggtgagctacgacggctcggtccgc
aactcggaggccaacctcgtccagttccactacggcgacgacgagctcgacccggcgatg
atggaggacaaggatggccgtccagtcaacttcgagcggacgctcctccaccagcgcgct
ctcgccttcgtcgcctcgcccgccttcaccggcgtggtctcgcggaccattgcctccgag
ccggccaagttcgaggtcgagctgcgcgccttcgtcgcgagcaagctcctgccgtcgctg
ccaggcgcaccggctaacggagtcgccctcccgcctccggccctcgagccgaccaaggtg
ggcgtcggcgcaaagagctcgccgcgcaaggccaagtacctcgcgagcaaggtggagccc
ggcaccgccgtcggagcggtcggcgcgcagtcgatcggcgagccgggcacgcagatgacg
ctcaagacgttccactttgcgggcgtcgcctcgatgaacatcacactcggcgtgccgcgc
atcaaggagatcatcaacgccgccaagaagatctcgacgccgatcatcaaggccgagctc
gacaagccgttcgacctgaccgccgcgcgcgtggtcaaggggcggatggagcggaccgag
ctcggccagatctgcgagtccgtcgtcgaggtgtacgacctggtggagtgctacatctcg
gtcaagctcgacctcgccctcatcgagcggctccacctcgccgtcaccgtcgcctccgtc
cgcacctccatcctcgccgcgccgaagatgaagctgcacgagaatgacgtgcgcgtgcgc
tcctcggcggaggtgcgcgtgcacccggcgcgcgtcagccgcgagcacctcgccctcccc
gagctgcaccggctgcgcgggatgctgctgacagtgctggtgtgcggcatcaaggaggtg
acgcgcgccgtcatcacgcagaaggaggagggcgagaagagcgaggtggagaaggcgagc
ggcggcccctgctacaagctgctcgtcgagggcgccgggctgagggacgtcctcggcgtg
cgcggcgtgcgcggcggcgcgacgcgatcgacgcacatcgccgaggtcgagaagacgctc
ggcatcgaggcggcgcggcagaccatcatggacgagatccagtacacgatggggcagcac
gggatggagatcgactgccggcacgtcacgctgctcgccgatgtcatgtgcttccgcgga
gaggtgctcggcatcacgcgcttcggcgtgccgaagatgaagcagtcggtgctcatgctc
gcctccttcgagaagacgacggaccacctcttcgaggcggcggtccactcgcgcaccgac
gccatccgcggcgtctccgagtgtatcatcctcggcatcccgatcccgctcggcaccggc
atcttcaagctgctgcagcaggtgccgaaggccgtcctcccaaagtcggagcccctgctg
ctgccctcgacagagaaaaggttgaggttcggcgctcgatag
DBGET
integrated database retrieval system