Emiliania huxleyi: EMIHUDRAFT_462689 Help Entry EMIHUDRAFT_462689 CDS       T02915                                  Name (RefSeq) hypothetical protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism ehx  Emiliania huxleyi Pathway ehx03013   Nucleocytoplasmic transport ehx03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ehx00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     EMIHUDRAFT_462689    03015 mRNA surveillance pathway     EMIHUDRAFT_462689  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ehx03019]     EMIHUDRAFT_462689 Enzymes [BR:ehx01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      EMIHUDRAFT_462689     5.6.2.5  RNA 5'-3' helicase      EMIHUDRAFT_462689 Messenger RNA biogenesis [BR:ehx03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      EMIHUDRAFT_462689    mRNA cycle factors     Common to processing body (P body) and stress granule      EMIHUDRAFT_462689 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 UPF1_Zn_bind AAA_30 AAA_19 UPF1_1B_dom ResIII DEAD NPHP3_N AAA_25 SLFN-g3_helicase nSTAND3 PhoH Helicase_RecD Flavi_DEAD UvrD-helicase AAA_22 AAA_5 SRP54 Motif Other DBs NCBI-GeneID:  17277289 NCBI-ProteinID:  XP_005784446 JGI:  Emihu1_462689 UniProt:  A0A0D3K8D2 R1DAZ4 LinkDB All DBs Position Unknown AA seq 1025 aa AA seqDB search MEYEEFQASQASQPFAFETQDDDDDTPQPFNFIDDHEEDGGGGGGADGPAAAGAAADDMM TCAVCDDGGGASAASVGAGAGDGLEFVEEDEREAPVPSELPAWACSYCNVHTPSAVVKCV TTGRWFCNYRPPGLPASCIVYHLIKSRNNEVTLHAESPLGEITLECFLTGTKNVFSLGFV PVKEDLVVLLARDVDVSGIEAASDSTLAPWCPAGGCTDASRTRPSQDASDWDLTKWQPLA FVPWLVKQPTDSEALRARPCSVAQISRLEELWRTNPAATYADTLSAEGDALDGGEPAPIQ RQYEDAYQYQSIMGPLALNKRRLAYFTLPSNEAELRLVGGGGPAPPPACDELLLRHPGDA SHPPFEAQQSATGTVVRLNHASEEVGLELRSGGGAPTDLSHGYSVDVVWKSVAYDRMQAT AAPPPDIAHLCMPGGTALKTFAVDETSVSGYIYHRLLGHEVEQPPVRTPLPRRFGAPGLP ELNHSQVLAVKTVLQKALSIVQGPPGTGKTVTSASIVYHLCKQNTGQTLVCAPSNVAVDQ LSEKIHMTGLRVLRFCAKSRESADSRVEYLTLHYQVRHLDSPANAELRKLQALKEELGEL SQADEKRFNSLRRRAELEILSAADVVCCTCSAAGDPRISSLRFRQCLIDEATQAPEPECL IPIVLGAKQLVLVGDHQQLGPVVMCKKAARAGLGVSLFERLVELQVRPIRLQVQHPGAGA VRAGGGRLGRRLPGAREGLHHPLVRPLEPVAGHRLPLRPAPPQRRPHARAVRPGRAGQPK GGGASRGGPALRTPPLQRHLCAPSPRPPLGPPLRRKRRRLLLARPRGRHAPARPWRRRPA RRRRRVRHAGLVRLRLSALRVAALRPVRHAGLLGPLARGRLAGQRLRLAGRLRGGRVRWL GLRLAGGVLLRRRRAQRPPLRLLAGLCVGRLVLRLLLARRRVPLRRRLLLRRRLRLPGRL PEPGRRRRERVLVAGVRLRVAARVRLAGRVAALAALRAKVAGAPDPTPPSLTGEGQRLRC DSDCP NT seq 3078 nt NT seq  +upstreamnt  +downstreamnt atggagtacgaagaatttcaagcctcgcaggcgagccagccgttcgccttcgagacccag gacgacgacgacgacacccctcagcccttcaacttcatcgacgaccacgaggaggacggc ggcgggggcggcggtgccgatggcccggccgcggcgggcgcagcggcggacgacatgatg acgtgcgcggtctgcgacgacggcggcggcgcctcggccgcctcggtcggcgccggcgcc ggtgacggcctcgagtttgtggaggaggacgagcgtgaggcgccggtgccgtccgagctg ccggcgtgggcgtgcagctactgcaacgtgcacactccgtcggcggtggtcaagtgcgtg acgacggggcgctggttctgcaactaccgtccgcccgggctgcccgcctcgtgcatcgtc taccacctgatcaagtctcgcaacaacgaggtgacgctgcacgcagagtctccgctcgga gagatcacgctcgagtgcttcctgaccgggacgaagaacgtcttctcgctcgggttcgtg ccggtcaaggaggacctcgtcgtgctgctcgcgcgcgacgtcgacgtgagcggcatcgag gccgcctccgactccaccctcgccccgtggtgccccgccggaggctgcactgacgcatcc cggacgcgtccctcgcaggacgcctcggactgggacctgaccaagtggcagccgctcgcc tttgtcccgtggcttgtcaagcagccaaccgactcggaggcgctgcgcgcacgcccctgc tcggtggcgcagatctcgcggctcgaggagctgtggaggaccaacccggccgcgacctac gccgacactctcagcgccgaaggggacgctctcgacggcggcgagccggcgcccatccag cgccagtacgaggacgcctaccagtaccagtccatcatgggcccgctcgcgctcaacaag cgcaggctggcctacttcactctcccctccaacgaggccgagctgaggctggtcggaggc ggcgggccggcgccgccgccggcatgcgacgagctgctcctccgccaccccggggacgct agccacccgcccttcgaggcgcagcagtcagcgaccggcacggtggtgcgcctcaaccac gccagcgaggaggtcgggctcgagctgcgctcgggcggcggagcgccgactgacctcagc cacggctactcggtcgacgtcgtgtggaagtcggttgcgtacgaccgcatgcaggcaacc gctgccccaccgccggacattgcacacctttgcatgccgggggggacggcgctcaagacc ttcgccgtcgacgagacgtccgtctccggctacatctaccaccgcctcctcggccacgag gtcgagcagccgccggtacggacgccgctgccgcgccgcttcggcgcgcccggcttgccc gagctcaaccacagccaggtgctcgcggtcaagacggtgctgcaaaaggccctctccatt gtgcagggcccgcccggcaccggcaagaccgtcacctccgcctccatcgtctaccacctc tgcaagcaaaacacgggccagaccctcgtctgcgcgccctcgaacgtcgccgtcgaccag ctctcggagaagatccacatgacagggctgcgcgtgctgcgcttctgcgcaaagtcgcgc gagagcgcagactcgcgcgtcgagtacctcacgctccactaccaggtccgccacctcgac tcgcctgccaacgcggagctgcgcaagctgcaggccctcaaggaggagctgggcgagctc tcgcaggcggacgagaagcggttcaactcgctccgccgccgcgccgagctcgagatcctc tcggcggcagacgtggtctgctgcacctgctcagcggcgggcgacccgcgcatctcgtcg ctccgcttccggcagtgcctcatcgacgaggcgacgcaggcgcccgagccggagtgcctc atcccgatcgtgctcggcgcaaagcagctcgtactcgtcggcgaccaccagcagctcggc cccgtcgtcatgtgcaagaaggcggcacgcgccggcctcggcgtctcgctcttcgagcgg ctcgtcgagctgcaggtgcggccgatccggctgcaggtccagcaccctggcgcaggagct gtacgcgcaggtggaggtcgcctcggtagacgccttccaggggcgcgagaaggacttcat catcctctcgtgcgtccgctcgaaccagtcgcagggcatcggcttcctctccgacccgcg ccgcctcaacgtcgccctcacgcgcgcgcggtacggcctggtcgtgctgggcaacccaaa ggaggcggagcttctcgtggagggcccgctctccgcactccgccgctccaacgtcacctt tgcgcgccctcgccccgaccgcccctcggaccgcctcttcgccggaaacgtcggcgcctt ctcctcgcaaggcctcggggacggcacgcccctgcccggccttggcggcggcggccggcg cggcggaggcggcgggtacggcacgcagggctcgtacggctacggctctcagcgctccga gtcgcagcgctccgacccgtacggcacgcagggcttctcgggcctctcgctcggggacgg ctcgcagggcagcggcttcgactcgcagggcggctacgcggcgggcgggtacgctggctc gggctacggctcgcaggcggggtactactccgcaggcgacgagcgcagcgtccacctctc cggcttctcgcaggactctgcgtcgggcgcctcgtactccggcttctcctcgcaaggcga cgagtaccgctacgacgacgcctactcctacggcggcggctacgcctcccagggaggctc ccagagccagggcggcggaggagggagcgggtactcgtcgcaggcgtccggctacgcgtc gcagcacgcgtacgcctcgcagggcgcgtcgcagccctcgcagccctaagagcgaaagta gcgggagctccggaccccacccccccctccctgacgggcgaggggcagcggctgcgatgc gacagcgactgcccctga

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